Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0293.Seq
(820 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 149 2e-36
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 148 4e-36
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 145 3e-35
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 145 3e-35
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 145 3e-35
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 144 8e-35
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 144 8e-35
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 142 3e-34
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 141 4e-34
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 79 4e-15
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 79 4e-15
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 78 6e-15
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 78 6e-15
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 78 8e-15
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 76 3e-14
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 76 3e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 55 5e-08
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 55 5e-08
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.70
At3g12810.1 68416.m01598 SNF2 domain-containing protein / helica... 29 3.7
At1g14810.1 68414.m01770 semialdehyde dehydrogenase family prote... 29 4.9
At1g63970.1 68414.m07245 2C-methyl-D-erythritol 2,4-cyclodiphosp... 28 6.5
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 149 bits (361), Expect = 2e-36
Identities = 64/86 (74%), Positives = 77/86 (89%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDS-DLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVR 434
KFWEVI DEHG+DP+G Y+GDS DLQLERINVYYNEAS G+YVPR VL+DL+P TMD++R
Sbjct: 19 KFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIR 78
Query: 435 SGPFGCLFRPDNFVYGQNCAANNWAR 512
SGP+G +FRPDNFV+GQ+ A NNWA+
Sbjct: 79 SGPYGQIFRPDNFVFGQSGAGNNWAK 104
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = +1
Query: 598 FQMSHXXXXXXXXXXXXXXVNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISW 777
FQ+ H +++IREEYPDR++LTFSVFPSP+VSD VVEPYN TL
Sbjct: 134 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 193
Query: 778 SRILIHTFCLDNEA 819
LDNEA
Sbjct: 194 VENADECMVLDNEA 207
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 GQQLGKGHYTEGVEILESALDVIRREAEGCDCLQVFR-CHT 613
G KGHYTEG E++++ LDV+R+EAE CDCLQ F+ CH+
Sbjct: 99 GNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHS 139
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIG 255
MREI+++Q G CGNQIG
Sbjct: 1 MREILHVQGGQCGNQIG 17
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 148 bits (359), Expect = 4e-36
Identities = 61/85 (71%), Positives = 76/85 (89%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
KFWEV+ DEHGIDP+G Y G+SDLQLER+NVYYNEAS G+YVPR +L+DL+P TMD+VR+
Sbjct: 19 KFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDSVRT 78
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
GP+G +FRPDNFV+GQ+ A NNWA+
Sbjct: 79 GPYGQIFRPDNFVFGQSGAGNNWAK 103
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = +1
Query: 598 FQMSHXXXXXXXXXXXXXXVNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISW 777
FQ+ H +++IREEYPDR++LTFSVFPSP+VSD VVEPYN TL
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 778 SRILIHTFCLDNEA 819
LDNEA
Sbjct: 193 VENADECMVLDNEA 206
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 GQQLGKGHYTEGVEILESALDVIRREAEGCDCLQVFR-CHT 613
G KGHYTEG E++++ LDV+R+EAE CDCLQ F+ CH+
Sbjct: 98 GNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHS 138
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIG 255
MREI+++Q G CGNQIG
Sbjct: 1 MREILHIQGGQCGNQIG 17
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 145 bits (352), Expect = 3e-35
Identities = 62/85 (72%), Positives = 74/85 (87%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
KFWEV+ EHGIDP+G Y GDSDLQLERINVYYNEAS G++VPR VL+DL+P TMD++RS
Sbjct: 19 KFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRS 78
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
GP+G FRPDNFV+GQ+ A NNWA+
Sbjct: 79 GPYGQTFRPDNFVFGQSGAGNNWAK 103
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = +1
Query: 598 FQMSHXXXXXXXXXXXXXXVNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISW 777
FQ+ H +++IREEYPDR++LTFSVFPSP+VSD VVEPYN TL
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 778 SRILIHTFCLDNEA 819
LDNEA
Sbjct: 193 VENADECMVLDNEA 206
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 GQQLGKGHYTEGVEILESALDVIRREAEGCDCLQVFR-CHT 613
G KGHYTEG E+++S LDV+R+EAE CDCLQ F+ CH+
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIG 255
MREI+++Q G CGNQIG
Sbjct: 1 MREILHIQGGQCGNQIG 17
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 145 bits (352), Expect = 3e-35
Identities = 62/85 (72%), Positives = 74/85 (87%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
KFWEV+ EHGIDP+G Y GDSDLQLERINVYYNEAS G++VPR VL+DL+P TMD++RS
Sbjct: 19 KFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRS 78
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
GP+G FRPDNFV+GQ+ A NNWA+
Sbjct: 79 GPYGQTFRPDNFVFGQSGAGNNWAK 103
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = +1
Query: 598 FQMSHXXXXXXXXXXXXXXVNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISW 777
FQ+ H +++IREEYPDR++LTFSVFPSP+VSD VVEPYN TL
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 778 SRILIHTFCLDNEA 819
LDNEA
Sbjct: 193 VENADECMVLDNEA 206
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 GQQLGKGHYTEGVEILESALDVIRREAEGCDCLQVFR-CHT 613
G KGHYTEG E+++S LDV+R+EAE CDCLQ F+ CH+
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIG 255
MREI+++Q G CGNQIG
Sbjct: 1 MREILHIQGGQCGNQIG 17
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 145 bits (352), Expect = 3e-35
Identities = 64/86 (74%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDS-DLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVR 434
KFWEVI DEHGID +G Y GD+ DLQLERINVYYNEAS G+YVPR VL+DL+P TMD++R
Sbjct: 19 KFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIR 78
Query: 435 SGPFGCLFRPDNFVYGQNCAANNWAR 512
SGPFG +FRPDNFV+GQ+ A NNWA+
Sbjct: 79 SGPFGQIFRPDNFVFGQSGAGNNWAK 104
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = +1
Query: 598 FQMSHXXXXXXXXXXXXXXVNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISW 777
FQ+ H +++IREEYPDR++LTFSVFPSP+VSD VVEPYN TL
Sbjct: 134 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 193
Query: 778 SRILIHTFCLDNEA 819
LDNEA
Sbjct: 194 VENADECMVLDNEA 207
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 GQQLGKGHYTEGVEILESALDVIRREAEGCDCLQVFR-CHT 613
G KGHYTEG E++++ LDV+R+EAE CDCLQ F+ CH+
Sbjct: 99 GNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHS 139
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIG 255
MREI+++Q G CGNQIG
Sbjct: 1 MREILHIQGGQCGNQIG 17
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 144 bits (348), Expect = 8e-35
Identities = 63/85 (74%), Positives = 74/85 (87%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
KFWEVI DEHGID +G Y GDS LQLERI+VY+NEAS GKYVPR VL+DL+P TMD++RS
Sbjct: 19 KFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRS 78
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
GPFG +FRPDNFV+GQ+ A NNWA+
Sbjct: 79 GPFGQIFRPDNFVFGQSGAGNNWAK 103
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/74 (47%), Positives = 43/74 (58%)
Frame = +1
Query: 598 FQMSHXXXXXXXXXXXXXXVNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISW 777
FQ+ H +++IREEYPDR+++TFSVFPSP+VSD VVEPYN TL
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 778 SRILIHTFCLDNEA 819
LDNEA
Sbjct: 193 VENADECMVLDNEA 206
Score = 57.6 bits (133), Expect = 9e-09
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 GQQLGKGHYTEGVEILESALDVIRREAEGCDCLQVFR-CHT 613
G KGHYTEG E+++S LDV+R+EAE DCLQ F+ CH+
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHS 138
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIG 255
MREI+++Q G CGNQIG
Sbjct: 1 MREILHIQGGQCGNQIG 17
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 144 bits (348), Expect = 8e-35
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
KFWEV++ EHGID +G Y GDS+LQLER+NVYYNEAS G+YVPR VL+DL+P TMD+VRS
Sbjct: 19 KFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRS 78
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
GP+G +FRPDNFV+GQ+ A NNWA+
Sbjct: 79 GPYGQIFRPDNFVFGQSGAGNNWAK 103
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/74 (47%), Positives = 43/74 (58%)
Frame = +1
Query: 598 FQMSHXXXXXXXXXXXXXXVNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISW 777
FQ+ H +++IREEYPDR+++TFSVFPSP+VSD VVEPYN TL
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 778 SRILIHTFCLDNEA 819
LDNEA
Sbjct: 193 VENADECMVLDNEA 206
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 GQQLGKGHYTEGVEILESALDVIRREAEGCDCLQVFR-CHT 613
G KGHYTEG E+++S LDV+R+EAE CDCLQ F+ CH+
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIG 255
MREI+++Q G CGNQIG
Sbjct: 1 MREILHIQGGQCGNQIG 17
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 142 bits (344), Expect = 3e-34
Identities = 59/85 (69%), Positives = 74/85 (87%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
KFWEV+ EHGID +G Y G++DLQLER+NVYYNEAS G++VPR VL+DL+P TMD+VRS
Sbjct: 19 KFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRS 78
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
GP+G +FRPDNFV+GQ+ A NNWA+
Sbjct: 79 GPYGQIFRPDNFVFGQSGAGNNWAK 103
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = +1
Query: 598 FQMSHXXXXXXXXXXXXXXVNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISW 777
FQ+ H +++IREEYPDR++LTFSVFPSP+VSD VVEPYN TL
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 778 SRILIHTFCLDNEA 819
LDNEA
Sbjct: 193 VENADECMVLDNEA 206
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 GQQLGKGHYTEGVEILESALDVIRREAEGCDCLQVFR-CHT 613
G KGHYTEG E+++S LDV+R+EAE CDCLQ F+ CH+
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIG 255
MREI+++Q G CGNQIG
Sbjct: 1 MREILHIQGGQCGNQIG 17
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 141 bits (342), Expect = 4e-34
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
KFWEVI EHGID +G GD+DLQLERINVY+NEAS GKYVPR VL+DL+P TMD++RS
Sbjct: 19 KFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRS 78
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
GPFG +FRPDNFV+GQ+ A NNWA+
Sbjct: 79 GPFGQIFRPDNFVFGQSGAGNNWAK 103
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/74 (47%), Positives = 43/74 (58%)
Frame = +1
Query: 598 FQMSHXXXXXXXXXXXXXXVNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISW 777
FQ+ H +++IREEYPDR+++TFSVFPSP+VSD VVEPYN TL
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 778 SRILIHTFCLDNEA 819
LDNEA
Sbjct: 193 VENADECMVLDNEA 206
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 GQQLGKGHYTEGVEILESALDVIRREAEGCDCLQVFR-CHT 613
G KGHYTEG E+++S LDV+R+EAE CDCLQ F+ CH+
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIG 255
MREI+++Q G CGNQIG
Sbjct: 1 MREILHIQGGQCGNQIG 17
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.0 bits (186), Expect = 4e-15
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +3
Query: 264 WEVISDEHGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
WE+ EHGI P G D+ + + + N +++E AGK+VPR V +DL+P +D VR+
Sbjct: 21 WELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
G + LF P+ + G+ AANN+AR
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFAR 105
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +1
Query: 655 VNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISWSRILIHTFCLDNEA 819
+ R+ +Y + L F+++PSP+VS VVEPYN+ L + S LDNEA
Sbjct: 154 LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEA 208
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.0 bits (186), Expect = 4e-15
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +3
Query: 264 WEVISDEHGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
WE+ EHGI P G D+ + + + N +++E AGK+VPR V +DL+P +D VR+
Sbjct: 21 WELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
G + LF P+ + G+ AANN+AR
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFAR 105
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +1
Query: 655 VNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISWSRILIHTFCLDNEA 819
+ R+ +Y + L F+++PSP+VS VVEPYN+ L + S LDNEA
Sbjct: 154 LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEA 208
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 78.2 bits (184), Expect = 6e-15
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +3
Query: 264 WEVISDEHGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
WE+ EHGI P G GD + + N +++E AGK+VPR V +DL+P +D VR+
Sbjct: 21 WELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
G + LF P+ + G+ AANN+AR
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFAR 105
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 655 VNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISWSRILIHTFCLDNEA 819
+ R+ +Y + L F+V+PSP+VS VVEPYN+ L + S + LDNEA
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEA 208
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 78.2 bits (184), Expect = 6e-15
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +3
Query: 264 WEVISDEHGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
WE+ EHGI P G GD + + N +++E AGK+VPR V +DL+P +D VR+
Sbjct: 21 WELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
G + LF P+ + G+ AANN+AR
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFAR 105
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 655 VNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISWSRILIHTFCLDNEA 819
+ R+ +Y + L F+V+PSP+VS VVEPYN+ L + S + LDNEA
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEA 208
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 77.8 bits (183), Expect = 8e-15
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +3
Query: 264 WEVISDEHGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
WE+ EHGI P G DS + + N +++E S+G++VPR V +DL+P +D VR+
Sbjct: 21 WELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRT 80
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
G + LF P+ + G+ AANN+AR
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFAR 105
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +1
Query: 655 VNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISWSRILIHTFCLDNEA 819
+ R+ ++ + L F+++PSP+VS VVEPYN+ L + S LDNEA
Sbjct: 154 LERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEA 208
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 205 MREIINLQVGSCGNQIGESSGR*YLTSTASIQADAT 312
MREII++ +G G Q+G S Y IQ D T
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLE-HGIQPDGT 35
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 75.8 bits (178), Expect = 3e-14
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +3
Query: 264 WEVISDEHGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
WE+ EHGI P G D + + N +++E AGK+VPR V +DL+P +D VR+
Sbjct: 21 WELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
G + LF P+ + G+ AANN+AR
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFAR 105
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 655 VNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISWSRILIHTFCLDNEA 819
+ R+ +Y + L F+V+PSP+VS VVEPYN+ L + S + LDNEA
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEA 208
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 75.8 bits (178), Expect = 3e-14
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +3
Query: 264 WEVISDEHGIDPSGCYHGDSDLQL--ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
WE+ EHGI P G D + + N +++E AGK+VPR V +DL+P +D VR+
Sbjct: 21 WELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80
Query: 438 GPFGCLFRPDNFVYGQNCAANNWAR 512
G + LF P+ + G+ AANN+AR
Sbjct: 81 GTYRQLFHPEQLISGKEDAANNFAR 105
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 655 VNRIREEYPDRIILTFSVFPSPRVSDCVVEPYNTTLRSISWSRILIHTFCLDNEA 819
+ R+ +Y + L F+V+PSP+VS VVEPYN+ L + S + LDNEA
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEA 208
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
+FW+ + EHGI G + +R +V++ +A Y+PR +LIDL+P ++ +++
Sbjct: 20 EFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQN 79
Query: 438 GPFGCLFRPDNFVYGQN--CAANNWA 509
G + L+ +N + A NNWA
Sbjct: 80 GEYRNLYNHENIFLSDHGGGAGNNWA 105
Score = 35.5 bits (78), Expect = 0.043
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +1
Query: 664 IREEYPDRIILTFSVFPSP-RVSDCVVEPYNTTLRSISWSRILIHTFC---LDNEA 819
+ + Y +++ T+SVFP+ SD VV+PYN+ L + R+ ++ C LDN A
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLL---TLKRLTLNADCVVVLDNTA 209
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 208 REIINLQVGSCGNQIG 255
REII LQVG CGNQIG
Sbjct: 3 REIITLQVGQCGNQIG 18
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 KFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRS 437
+FW+ + EHGI G + +R +V++ +A Y+PR +LIDL+P ++ +++
Sbjct: 20 EFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQN 79
Query: 438 GPFGCLFRPDNFVYGQN--CAANNWA 509
G + L+ +N + A NNWA
Sbjct: 80 GDYRNLYNHENIFVADHGGGAGNNWA 105
Score = 35.5 bits (78), Expect = 0.043
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +1
Query: 664 IREEYPDRIILTFSVFPSP-RVSDCVVEPYNTTLRSISWSRILIHTFC---LDNEA 819
+ + Y +++ T+SVFP+ SD VV+PYN+ L + R+ ++ C LDN A
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLL---TLKRLTLNADCVVVLDNTA 209
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 208 REIINLQVGSCGNQIG 255
REII LQVG CGNQIG
Sbjct: 3 REIITLQVGQCGNQIG 18
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.5 bits (68), Expect = 0.70
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2
Query: 545 SALDVIRREAEGCDCLQVF 601
+++ V+R+EAE C+CLQVF
Sbjct: 3 NSVGVVRKEAENCNCLQVF 21
>At3g12810.1 68416.m01598 SNF2 domain-containing protein / helicase
domain-containing protein similar to transcriptional
activator SRCAP [Homo sapiens] GI:5106572; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain
Length = 2055
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1
Query: 658 SRVAYLIRNRYRHLASVTSENLQAIAALSFPSNDI*SR 545
SRVA NRYR+ A+ E+ A+ +FP+ND+ SR
Sbjct: 1918 SRVA--AENRYRNAANACIEDSFGWASNTFPANDLKSR 1953
>At1g14810.1 68414.m01770 semialdehyde dehydrogenase family protein
similar to SP:O31219 Aspartate-semialdehyde
dehydrogenase (EC 1.2.1.11) (ASA dehydrogenase) (ASADH)
{Legionella pneumophila}; contains Pfam profiles
PF02774: Semialdehyde dehydrogenase dimerisation domain,
PF01118: Semialdehyde dehydrogenase NAD binding domain
Length = 375
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 434 VGTLRMPI-QTGQFRLRTKLCGQQLGKGHYTEGVEILESAL 553
VG +R + Q G F L +CG Q+ KG V+I E L
Sbjct: 335 VGRIRRDVSQDGNFGLDIFVCGDQIRKGAALNAVQIAEMLL 375
>At1g63970.1 68414.m07245 2C-methyl-D-erythritol
2,4-cyclodiphosphate synthase, putative similar to
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
GI:7621712 from [Catharanthus roseus]
Length = 231
Score = 28.3 bits (60), Expect = 6.5
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = -3
Query: 539 ESLLLQCSVPCPV-VGRTVLSVDEIVRSE*ASEGSRPHRVHRGRLQVDKNRARNIFPSRC 363
+SL L C V + + V+E V SE ++ + P R+ G D +R +P
Sbjct: 39 KSLSLSCRPSASVSAASSAVDVNESVTSEKPTK-TLPFRIGHG---FDLHRLEPGYPLII 94
Query: 362 --LVVVHVDPFELQVGVAVVASAWIDAVLVRYHLPELSPIWFPQEPTWR 222
+V+ H E V+ +DA+L LP++ I+ +P W+
Sbjct: 95 GGIVIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWK 143
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,533,469
Number of Sequences: 28952
Number of extensions: 364454
Number of successful extensions: 971
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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