Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0292.Seq
         (827 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.32 
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   2.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -2

Query: 631  WPSRCTPCSASTCARCQTPTTRTSDTSACSRPWTAP*ATCCGHGEDVPAPTDV 473
            W S  T    +T    +T TTR + TS  +RP T    T    G  +P P  V
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT---QGTTIPPPAVV 1092


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/41 (21%), Positives = 17/41 (41%)
 Frame = -2

Query: 634 PWPSRCTPCSASTCARCQTPTTRTSDTSACSRPWTAP*ATC 512
           P+P RC P    +C       + + ++   S  +T    +C
Sbjct: 28  PYPPRCPPIYEPSCQYSPVSNSDSENSEVSSNSYTPKIKSC 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,833
Number of Sequences: 336
Number of extensions: 3117
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)