Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0292.Seq
         (827 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    26   1.2  
CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    26   1.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.8  

>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -2

Query: 709 ALFMYQPQARXELPRPAXXTQERLPPWPSRCTPCSASTCARCQTPTT 569
           AL+  Q       P  +   ++ +   P++    S  TCA CQT TT
Sbjct: 23  ALYTRQNPGTNRPPNRSQKAKQTVKTPPAQGNRRSGVTCANCQTTTT 69


>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 666 LGSSXLACGWYMNSAKFPSG 725
           LG      GW +NS +FPSG
Sbjct: 422 LGGELSNLGWNLNSLQFPSG 441


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 652 TQERLPPWPSRCTPCSAST 596
           T+  + P+ SRCT C A T
Sbjct: 892 TENEMRPYISRCTVCEAPT 910


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,426
Number of Sequences: 2352
Number of extensions: 13974
Number of successful extensions: 48
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)