Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0290.Seq
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_214| Best HMM Match : Arf (HMM E-Value=0) 130 1e-30
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 68 7e-12
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 67 1e-11
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 64 1e-10
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 62 6e-10
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 57 1e-08
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 54 9e-08
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 54 2e-07
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 49 5e-06
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 48 1e-05
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 40 0.003
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 32 0.57
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 32 0.57
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 30 2.3
SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 29 3.0
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 29 4.0
SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 4.0
SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8) 29 5.3
SB_45893| Best HMM Match : Arc (HMM E-Value=3.3) 28 7.0
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 28 9.3
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 28 9.3
SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15) 28 9.3
SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05) 28 9.3
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 28 9.3
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 28 9.3
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 28 9.3
SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056) 28 9.3
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 28 9.3
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 28 9.3
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 28 9.3
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 28 9.3
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 28 9.3
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 28 9.3
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 130 bits (314), Expect = 1e-30
Identities = 72/152 (47%), Positives = 92/152 (60%), Gaps = 3/152 (1%)
Frame = +1
Query: 286 LAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLP 465
+AQHVPTLHPTSEELS+G MRFTTFDLGGH+QARR+W+DYFPAV+ IVF++D D RL
Sbjct: 1 MAQHVPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLA 60
Query: 466 ESKAELDSLLTDETPVTALC*FSATRLINPVLPVKTNYVTFSI-CISRPLEREKYQGPSF 642
ESK ELDSLL DE + ++ P V +Y+ + + +
Sbjct: 61 ESKKELDSLLADEQLSSCPVLILGNKIDIPG-AVGEDYIRQNFGLFGQTTGKGSVAAKDL 119
Query: 643 PVGPLGAF--HVLGAEASGATAKGFRWLAQYI 732
P+ F VL E G +GFRWL++YI
Sbjct: 120 ATRPMELFMCSVLKREGYG---EGFRWLSEYI 148
Score = 71.3 bits (167), Expect = 8e-13
Identities = 36/66 (54%), Positives = 42/66 (63%)
Frame = +3
Query: 510 SNCPVLILGNKIDKPGAASEDELRHFFNLYQQTTGKGKVSRSELPGRAAGSFSCARC*SV 689
S+CPVLILGNKID PGA ED +R F L+ QTTGKG V+ +L R F C+
Sbjct: 76 SSCPVLILGNKIDIPGAVGEDYIRQNFGLFGQTTGKGSVAAKDLATRPMELFMCSVL-KR 134
Query: 690 RGYGEG 707
GYGEG
Sbjct: 135 EGYGEG 140
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 68.1 bits (159), Expect = 7e-12
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +1
Query: 256 TLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 435
T+L+ LK + + VPTL E ++ ++ FT +D+GG + R +WR Y+ I+F+
Sbjct: 11 TILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQGCQGIIFV 70
Query: 436 VDACDRPRLPESKAELDSLLTDE 504
VD+ DR R E++ EL LL +E
Sbjct: 71 VDSADRERAEEARNELHKLLAEE 93
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/94 (35%), Positives = 54/94 (57%)
Frame = +1
Query: 223 LVSGT*QCREETLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRD 402
L+ G + T+L+ LK D +PT+ E + +++FT +D+GG + R +WR
Sbjct: 94 LMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEYKNIKFTVWDIGGQDKIRLLWRL 153
Query: 403 YFPAVDAIVFLVDACDRPRLPESKAELDSLLTDE 504
YF ++F+VD+ DR R+ E+K EL LL +E
Sbjct: 154 YFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEE 187
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 65.7 bits (153), Expect = 4e-11
Identities = 31/100 (31%), Positives = 57/100 (57%)
Frame = +1
Query: 205 EKVGQALVSGT*QCREETLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 384
+K + L+ G + T+L+ LK + +PT+ E + ++ FT +D+GG +
Sbjct: 15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKNISFTVWDVGGQDKI 74
Query: 385 RRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDE 504
R +WR YF ++++VD+ DR R+ ESK EL+ +L ++
Sbjct: 75 RPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQED 114
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/100 (30%), Positives = 57/100 (57%)
Frame = +1
Query: 205 EKVGQALVSGT*QCREETLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 384
+K + L+ G + T+L+ LK + +PT+ E + ++ FT +D+GG +
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74
Query: 385 RRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDE 504
R +WR YF ++F+VD+ DR R+ E++ EL+ +L ++
Sbjct: 75 RPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNED 114
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 61.7 bits (143), Expect = 6e-10
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 247 REETLLHMLKDDRLAQHVPTLHPTSEELS-IGSMRFTTFDLGGHQQARRVWRDYFPAVDA 423
R+ T+L+ LK VPT+ E +S ++ F+ +D+GG + RR+WR YF +
Sbjct: 121 RKTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEG 180
Query: 424 IVFLVDACDRPRLPESKAELDSLL 495
I+F+VD+ D+ R+ E + EL +L
Sbjct: 181 IIFVVDSADKERIFEVREELTRVL 204
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 480 TRLVAH*RDASNCPVLILGNKIDKPGAASEDELRHFFNLYQQTTGKGKV 626
TR++ H + + PV+++ NK D GA D++ +LY+ T ++
Sbjct: 201 TRVLQH-SELNGVPVVVVANKQDLLGAIGPDKMAEELSLYKHTKNPWRI 248
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 TLLHMLKDDRLAQHVPTLHPTSEELS-IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVF 432
T+L+ LK +PT+ E L ++ T +D+GG + R +WR YF + ++F
Sbjct: 34 TILYKLKLKETVSTIPTIGFNVETLQPTKNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLF 93
Query: 433 LVDACDRPRLPESKAELDSLLTDE 504
+VD+ D R+PE+K EL +L +
Sbjct: 94 VVDSSDVLRMPEAKEELHGVLDSD 117
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 54.4 bits (125), Expect = 9e-08
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 169 LVHWSVGISWSMEKVGQALVSGT*QCREETLLHMLKDDRLAQH-VPTLHPTSEELSIGSM 345
++ W + W E++ LV G + T ++++ + ++ +PT+ ++S G++
Sbjct: 8 ILDWFKSLFWK-EEMELTLV-GLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNV 65
Query: 346 RFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLL 495
+D+GG + R +W Y V+ IV++VDA D +L SK EL +LL
Sbjct: 66 TIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLL 115
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 519 PVLILGNKIDKPGAASEDELRHFFNL 596
P+L+LGNK D P + E EL NL
Sbjct: 124 PILVLGNKKDLPNSLDEKELVERLNL 149
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +1
Query: 322 EELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTD 501
E + ++ FT +D+GG + R +WR YF ++F+VD+ DR R E+K EL +L +
Sbjct: 503 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAE 562
Query: 502 E 504
+
Sbjct: 563 D 563
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +1
Query: 346 RFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDE 504
+ +D+GG + R WR+YF + D ++++VD+ D+ RL + K EL LL +E
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 48.8 bits (111), Expect = 5e-06
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 361 DLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTD 501
D+GG + R +WR YF ++F+VD DR R+ E++ EL ++ D
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIIND 189
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 TLLHMLKDDRLAQHVPTLHPTSEELS-IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVF 432
++L+ K VPT E + +RF +D+GG +Q R +W+ Y DA+++
Sbjct: 36 SILYRNKFREYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIY 95
Query: 433 LVDACDRPRLPESKAELDSLL 495
+VD+ +L E++ EL +LL
Sbjct: 96 VVDSTSAGKLEEARDELFNLL 116
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1
Query: 370 GHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDE 504
G R WR Y+ DA++++VD+ D+ R+ SK EL ++L ++
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEED 199
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 274 KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 438
+ D L V T + + F FD+GG + R+ W F V AI+F V
Sbjct: 171 EQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCV 225
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +1
Query: 274 KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDA 444
K D L T E I S+ F D+GG + R W F V +I+FLV +
Sbjct: 383 KQDMLHSRKATKGIVEHEFMIKSIPFKMVDVGGQRSQRAKWFQCFDEVTSILFLVSS 439
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 223 LVSGT*QCREETLLHMLKDDRLAQHVPTLHPTSEEL-SIGSMRFTTFDLGGHQQARRVWR 399
L+ G + T+L L + + PT + + S G R +D+GG ++ R W+
Sbjct: 21 LLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRKIRPYWK 80
Query: 400 DYFPAVDAI 426
+YF D +
Sbjct: 81 NYFENTDIL 89
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 31.9 bits (69), Expect = 0.57
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 340 SMRFTTFDLGGHQQARRVWRDYF 408
S++FT +D+GG Q+ R +WR Y+
Sbjct: 232 SLKFTIWDVGGLQKLRPLWRHYY 254
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 274 KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 438
+ D L V T + + F FD+GG + R+ W F V AI++ V
Sbjct: 220 EQDLLRTRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV 274
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 274 KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 438
+ D L V T + + F FD+GG + R+ W F V AI++ V
Sbjct: 172 EQDLLRTRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV 226
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 274 KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDR 453
+ D L PT + ++ F D+GG + RR W F V +I+FLV +
Sbjct: 170 EQDVLRARAPTSGIIEYPFDLETIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEY 229
Query: 454 PR-LPESKAE 480
+ L ES +E
Sbjct: 230 DQVLVESDSE 239
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 352 TTFDLGGHQQARRVWRDYFPAV 417
T +DLGG + R +W+DY+ V
Sbjct: 7 TVYDLGGGAKIRGIWKDYYAEV 28
>SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 349 FTTFDLGG-HQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLT-DETPV 513
FTTFDLGG ++ +WR + AI+ L + + E +LD L+T TPV
Sbjct: 418 FTTFDLGGCMKELPLIWRSFSTESKAILPLCFL--KSQFLEEPVDLDELMTYSLTPV 472
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 361 DLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLL 495
D+GG + R+ W +F V A+VF E + + +++L
Sbjct: 168 DVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAML 212
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 501 RDASNCPVLILGNKIDKPGAASEDE 575
RD N P ++LGNK+D G A E
Sbjct: 316 RDQDNFPFILLGNKVDVEGRAVSQE 340
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -2
Query: 698 VAPDASAPST*KAPSGPTGKLGP*YFSLSS 609
V D +APS APS PTG GP +LSS
Sbjct: 69 VPSDPTAPSDPTAPSDPTGPTGPSDPTLSS 98
>SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 638
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 448 DRPRLPESKAELDSLLT 498
+ PRLPE+KA LD+LLT
Sbjct: 294 EMPRLPEAKATLDTLLT 310
>SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8)
Length = 304
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQGSYWRLVSEQRV*FSLGLRQTW 454
+ LHWQ RVY+ R+ A G R+ + V + + TW
Sbjct: 154 IPLHWQKRVYEDLLRDEALGVVERVPYGEPVTWCHRMVVTW 194
>SB_45893| Best HMM Match : Arc (HMM E-Value=3.3)
Length = 186
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 531 LGNKIDKPGAASEDELRHFFNLYQQTTGKGKVSRSELPGRAAGSFSCARC*SVRGYGEGL 710
LG+ ID+ S+ +RH +L ++ S LPGR++ + C +C + EG
Sbjct: 110 LGSCIDEE--RSQSSVRHGPDLTEELAVHAVRLGSRLPGRSSNAVDCVQCAATAAGREGG 167
Query: 711 PLARAVH 731
H
Sbjct: 168 DFVLCTH 174
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -3
Query: 490 TSLVQPWTPADVAGHTRRPGTLSRPPRGSSRATHDAPADAHRGRT 356
T+ + P P + RPG + PPR S P + RG +
Sbjct: 1733 TTFIDPRLPVNTTDRRPRPGPETEPPRRSRAPPPRPPPPSSRGHS 1777
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 579 IPLHWQKRVYEDLLRDEALG 598
>SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 471
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 272 IPLHWQKRVYEDLLRDEALG 291
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 620 IPLHWQKRVYEDLLRDEALG 639
>SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 176 IPLHWQKRVYEDLLRDEALG 195
>SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 1485
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQGSYWRLVSEQRV*FSLGLRQTW 454
+ LHWQ +VY R+ A G R+ + V + +R+T+
Sbjct: 726 IPLHWQQKVYDDLLRDEALGVIERVPYGEPVTWCHRMRETF 766
>SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05)
Length = 288
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 25 IPLHWQKRVYEDLLRDEALG 44
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 593 IPLHWQKRVYEDLLRDEALG 612
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 588 IPLHWQKRVYEDLLRDEALG 607
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +3
Query: 501 RDASNCPVLILGNKIDKP----GAASEDELRHFFNL-YQQTTGK 617
+DA P++++GNK D P + EL +N+ +Q+T+ K
Sbjct: 330 KDAEEVPMVLVGNKCDLPQRTVSTSDAQELAKSYNIPFQETSAK 373
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 325 IPLHWQKRVYEDLLRDEALG 344
>SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056)
Length = 437
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 131 IPLHWQKRVYEDLLRDEALG 150
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 622 IPLHWQKRVYEDLLRDEALG 641
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 608 IPLHWQKRVYEDLLRDEALG 627
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 546 IPLHWQKRVYEDLLRDEALG 565
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 680 IPLHWQKRVYEDLLRDEALG 699
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 177 IPLHWQKRVYEDLLRDEALG 196
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 603 IPLHWQKRVYEDLLRDEALG 622
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 576 VRLHWQHRVYQSCCRESAQG 517
+ LHWQ RVY+ R+ A G
Sbjct: 69 IPLHWQKRVYEDLLRDEALG 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,669,770
Number of Sequences: 59808
Number of extensions: 465973
Number of successful extensions: 1514
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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