Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0289.Seq
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    26   1.1  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            26   1.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.4  

>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 443 KQRRXEGGSKKKDENENQLKRTKA 514
           KQR  E   KKKDE   Q++R +A
Sbjct: 127 KQRAIEKDRKKKDEIHRQIERERA 150


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 443 KQRRXEGGSKKKDENENQLKRTKA 514
           KQR  E   KKKDE   Q++R +A
Sbjct: 127 KQRAIEKDRKKKDEIHRQIERERA 150


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -1

Query: 690 PQGQPGP-WPRAN*LGAHKGS-GNARQVGSPLQPVR 589
           P G PGP  PR   L  H+G  GN+  VG P  P R
Sbjct: 46  PPGAPGPVGPRG--LTGHRGEKGNSGPVGPPGAPGR 79


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +3

Query: 165  YKYEDCGPPLQCLPRSAFKRNGLQDCQFFQKVRFATCAVPALVLNR 302
            Y++ D    LQ +  +++  N L DC  +Q++ F   A+   ++ R
Sbjct: 1991 YRFRDRSYLLQAMTHASYSPNRLTDC--YQRLEFLGDAILDYLITR 2034


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,317
Number of Sequences: 2352
Number of extensions: 17558
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)