Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0288.Seq
(771 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 168 4e-42
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 167 7e-42
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 167 7e-42
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 167 7e-42
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 167 9e-42
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 166 2e-41
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 164 7e-41
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 164 7e-41
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 163 1e-40
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 96 2e-20
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 96 2e-20
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 95 3e-20
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 95 3e-20
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 95 3e-20
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 95 3e-20
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 92 3e-19
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 75 7e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 74 9e-14
At4g37190.1 68417.m05265 expressed protein 32 0.36
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.5
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 30 1.9
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 28 7.9
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 7.9
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 168 bits (408), Expect = 4e-42
Identities = 76/94 (80%), Positives = 83/94 (88%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEA 433
L+DLEPGTMDS+RSGPFGQIFRPD F FGQSGAGNNWAKGHYTEGAEL+D VLDVVRKEA
Sbjct: 66 LMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 434 ESCDCLQGFQLTHSLXGGTGSRYGHLLIFQNSEK 535
E+CDCLQGFQ+ HSL GGTGS G LLI + E+
Sbjct: 126 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 159
Score = 121 bits (291), Expect = 6e-28
Identities = 54/71 (76%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 239
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 240 VPRAISSTWSP 272
VPRA+ P
Sbjct: 61 VPRAVLMDLEP 71
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT 621
+ K REEYPDR+M T+SV PSPKVSDTVVEPYNAT
Sbjct: 153 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 187
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 167 bits (406), Expect = 7e-42
Identities = 76/94 (80%), Positives = 83/94 (88%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEA 433
L+DLEPGTMDSVRSGP+GQIFRPD F FGQSGAGNNWAKGHYTEGAEL+D VLDVVRKEA
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQLTHSLXGGTGSRYGHLLIFQNSEK 535
E+CDCLQGFQ+ HSL GGTGS G LLI + E+
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Score = 116 bits (279), Expect = 2e-26
Identities = 49/70 (70%), Positives = 58/70 (82%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 243 PRAISSTWSP 272
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT 621
+ K REEYPDR+M T+SV PSPKVSDTVVEPYNAT
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 167 bits (406), Expect = 7e-42
Identities = 76/94 (80%), Positives = 83/94 (88%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEA 433
L+DLEPGTMDS+RSGPFGQIFRPD F FGQSGAGNNWAKGHYTEGAEL+D VLDVVRKEA
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQLTHSLXGGTGSRYGHLLIFQNSEK 535
E+CDCLQGFQ+ HSL GGTGS G LLI + E+
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Score = 119 bits (286), Expect = 2e-27
Identities = 53/70 (75%), Positives = 58/70 (82%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 243 PRAISSTWSP 272
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT 621
+ K REEYPDR+M T+SV PSPKVSDTVVEPYNAT
Sbjct: 152 ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNAT 186
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 167 bits (406), Expect = 7e-42
Identities = 76/94 (80%), Positives = 83/94 (88%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEA 433
L+DLEPGTMDSVRSGP+GQIFRPD F FGQSGAGNNWAKGHYTEGAEL+D VLDVVRKEA
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQLTHSLXGGTGSRYGHLLIFQNSEK 535
E+CDCLQGFQ+ HSL GGTGS G LLI + E+
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Score = 116 bits (280), Expect = 1e-26
Identities = 50/70 (71%), Positives = 59/70 (84%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 243 PRAISSTWSP 272
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT 621
+ K REEYPDR+M T+SV PSPKVSDTVVEPYNAT
Sbjct: 152 ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNAT 186
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 167 bits (405), Expect = 9e-42
Identities = 75/94 (79%), Positives = 83/94 (88%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEA 433
L+DLEPGTMDS+RSGP+GQIFRPD F FGQSGAGNNWAKGHYTEGAEL+D VLDVVRKEA
Sbjct: 66 LMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 434 ESCDCLQGFQLTHSLXGGTGSRYGHLLIFQNSEK 535
E+CDCLQGFQ+ HSL GGTGS G LLI + E+
Sbjct: 126 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 159
Score = 125 bits (302), Expect = 3e-29
Identities = 54/71 (76%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 239
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 240 VPRAISSTWSP 272
VPRA+ P
Sbjct: 61 VPRAVLMDLEP 71
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT 621
+ K REEYPDR+M T+SV PSPKVSDTVVEPYNAT
Sbjct: 153 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 187
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 166 bits (403), Expect = 2e-41
Identities = 75/94 (79%), Positives = 83/94 (88%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEA 433
L+DLEPGTMDSVR+GP+GQIFRPD F FGQSGAGNNWAKGHYTEGAEL+D VLDVVRKEA
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 434 ESCDCLQGFQLTHSLXGGTGSRYGHLLIFQNSEK 535
E+CDCLQGFQ+ HSL GGTGS G LLI + E+
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Score = 123 bits (296), Expect = 2e-28
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 243 PRAISSTWSP 272
PRAI P
Sbjct: 61 PRAILMDLEP 70
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT 621
+ K REEYPDR+M T+SV PSPKVSDTVVEPYNAT
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 164 bits (398), Expect = 7e-41
Identities = 74/94 (78%), Positives = 82/94 (87%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEA 433
L+DLEPGTMDS+RSGP+GQ FRPD F FGQSGAGNNWAKGHYTEGAEL+D VLDVVRKEA
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQLTHSLXGGTGSRYGHLLIFQNSEK 535
E+CDCLQGFQ+ HSL GGTGS G LLI + E+
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Score = 122 bits (293), Expect = 3e-28
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 243 PRAISSTWSP 272
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT 621
+ K REEYPDR+M T+SV PSPKVSDTVVEPYNAT
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 164 bits (398), Expect = 7e-41
Identities = 74/94 (78%), Positives = 82/94 (87%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEA 433
L+DLEPGTMDS+RSGP+GQ FRPD F FGQSGAGNNWAKGHYTEGAEL+D VLDVVRKEA
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQLTHSLXGGTGSRYGHLLIFQNSEK 535
E+CDCLQGFQ+ HSL GGTGS G LLI + E+
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Score = 122 bits (293), Expect = 3e-28
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 243 PRAISSTWSP 272
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT 621
+ K REEYPDR+M T+SV PSPKVSDTVVEPYNAT
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 163 bits (396), Expect = 1e-40
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEA 433
L+DLEPGTMDS+RSGPFGQIFRPD F FGQSGAGNNWAKGHYTEGAEL+D VLDVVRKEA
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQLTHSLXGGTGSRYGHLLIFQNSEK 535
E+ DCLQGFQ+ HSL GGTGS G LLI + E+
Sbjct: 125 ENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Score = 121 bits (292), Expect = 5e-28
Identities = 54/70 (77%), Positives = 59/70 (84%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 243 PRAISSTWSP 272
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNAT 621
+ K REEYPDR+M T+SV PSPKVSDTVVEPYNAT
Sbjct: 152 ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNAT 186
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/87 (50%), Positives = 61/87 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P++ G+ A NN+A+GHYT G E+VD LD VRK A+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 437 SCDCLQGFQLTHSLXGGTGSRYGHLLI 517
+C LQGF + +++ GGTGS G LL+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLL 154
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 236
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNATXFSSSI 639
L + +Y + +++ PSP+VS VVEPYN+ + S+
Sbjct: 154 LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSL 194
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/87 (50%), Positives = 61/87 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P++ G+ A NN+A+GHYT G E+VD LD VRK A+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 437 SCDCLQGFQLTHSLXGGTGSRYGHLLI 517
+C LQGF + +++ GGTGS G LL+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLL 154
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 236
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNATXFSSSI 639
L + +Y + +++ PSP+VS VVEPYN+ + S+
Sbjct: 154 LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSL 194
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/87 (49%), Positives = 61/87 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P++ G+ A NN+A+GHYT G E+VD LD +RK A+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 437 SCDCLQGFQLTHSLXGGTGSRYGHLLI 517
+C LQGF + +++ GGTGS G LL+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLL 154
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNATXFSSSI 639
L + +Y + ++V PSP+VS +VVEPYN+ + S+
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/87 (49%), Positives = 61/87 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P++ G+ A NN+A+GHYT G E+VD LD +RK A+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 437 SCDCLQGFQLTHSLXGGTGSRYGHLLI 517
+C LQGF + +++ GGTGS G LL+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLL 154
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNATXFSSSI 639
L + +Y + ++V PSP+VS +VVEPYN+ + S+
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/87 (49%), Positives = 61/87 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P++ G+ A NN+A+GHYT G E+VD LD +RK A+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 437 SCDCLQGFQLTHSLXGGTGSRYGHLLI 517
+C LQGF + +++ GGTGS G LL+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLL 154
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNATXFSSSI 639
L + +Y + ++V PSP+VS +VVEPYN+ + S+
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/87 (49%), Positives = 61/87 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P++ G+ A NN+A+GHYT G E+VD LD +RK A+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 437 SCDCLQGFQLTHSLXGGTGSRYGHLLI 517
+C LQGF + +++ GGTGS G LL+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLL 154
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSPKVSDTVVEPYNATXFSSSI 639
L + +Y + ++V PSP+VS +VVEPYN+ + S+
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/87 (47%), Positives = 61/87 (70%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDKFXFGQSGAGNNWAKGHYTEGAELVDXVLDVVRKEAE 436
+DLEP +D VR+G + Q+F P++ G+ A NN+A+GHYT G E+VD L+ +RK A+
Sbjct: 68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLAD 127
Query: 437 SCDCLQGFQLTHSLXGGTGSRYGHLLI 517
+C LQGF + +++ GGTGS G LL+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLL 154
Score = 60.9 bits (141), Expect = 9e-10
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 236
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 562 YSVVPSPKVSDTVVEPYNATXFSSSI 639
+++ PSP+VS VVEPYN+ + S+
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSL 194
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 74.5 bits (175), Expect = 7e-14
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQ--SGAGNNWAKGHYTEGAELVDXVLDVVRK 427
L+DLEP ++ +++G + ++ + GAGNNWA G Y +G + + ++D++ +
Sbjct: 66 LIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124
Query: 428 EAESCDCLQGFQLTHSLXGGTGSRYGHLLI 517
EA+ D L+GF L HS+ GGTGS G L+
Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLL 154
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 245
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 246 RAI 254
RA+
Sbjct: 63 RAL 65
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSP-KVSDTVVEPYNA 618
L + Y +++ TYSV P+ + SD VV+PYN+
Sbjct: 154 LETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNS 188
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDKFXFGQ--SGAGNNWAKGHYTEGAELVDXVLDVVRK 427
L+DLEP ++ +++G + ++ + GAGNNWA G Y +G + + ++D++ +
Sbjct: 66 LIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124
Query: 428 EAESCDCLQGFQLTHSLXGGTGSRYGHLLI 517
EA+ D L+GF L HS+ GGTGS G L+
Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLL 154
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 245
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 246 RAI 254
RA+
Sbjct: 63 RAL 65
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 517 LPKFREEYPDRIMNTYSVVPSP-KVSDTVVEPYNA 618
L + Y +++ TYSV P+ + SD VV+PYN+
Sbjct: 154 LETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNS 188
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 32.3 bits (70), Expect = 0.36
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 230
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 231 GKYVPRAISSTWSPAPWTLSA 293
Y PR +S A T+S+
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 416 VVRKEAESCDCLQGFQLTHS 475
VVRKEAE+C+CLQ F ++ S
Sbjct: 7 VVRKEAENCNCLQVFFVSGS 26
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = -2
Query: 266 PSRRDGAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL 93
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S D VA L
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
Query: 92 ------TSLDMYDFPHFVL 54
+ +YD H VL
Sbjct: 64 LKSAKIRNTRIYDADHSVL 82
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 470 VSVGIPGGNHTIPLPFERRLKLXRRAQHPPCSVPWPSC 357
VS G+PG HT P ++ + +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -2
Query: 233 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 54
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,756,146
Number of Sequences: 28952
Number of extensions: 361087
Number of successful extensions: 972
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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