Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0287.Seq
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.5  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 505 AHIHRSTRESLPTSAEFRHP 564
           +H+  ++R SLPT+  F HP
Sbjct: 40  SHLMAASRLSLPTNPAFFHP 59


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 295  VPIKPKSVPAPAGNKMP 345
            VP+K  +VP P+G+  P
Sbjct: 1104 VPLKGTAVPPPSGSSGP 1120


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory
          receptor candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 99 NYNPRCFCYCLRVILI 52
          NYN    CY LR++LI
Sbjct: 48 NYNFTKKCYFLRMVLI 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,165
Number of Sequences: 336
Number of extensions: 3732
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)