BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0286.Seq (298 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 20 5.6 AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 20 5.6 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 20 5.6 >U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin protein. Length = 377 Score = 20.2 bits (40), Expect = 5.6 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -2 Query: 207 RYVSEFNISSCST 169 RYV E N+++C T Sbjct: 192 RYVPEGNMTACGT 204 >AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodopsin protein. Length = 154 Score = 20.2 bits (40), Expect = 5.6 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -2 Query: 207 RYVSEFNISSCST 169 RYV E N+++C T Sbjct: 68 RYVPEGNMTACGT 80 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 20.2 bits (40), Expect = 5.6 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = +3 Query: 18 RDFYRNAEVK 47 R+FY+NA+V+ Sbjct: 495 REFYKNADVR 504 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 53,143 Number of Sequences: 438 Number of extensions: 702 Number of successful extensions: 3 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3 length of database: 146,343 effective HSP length: 49 effective length of database: 124,881 effective search space used: 6119169 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 38 (20.3 bits)
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