Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0285.Seq
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074803-1|BAC11217.1| 807|Homo sapiens protein ( Homo sapiens ... 70 8e-12
AB051390-1|BAB18461.1| 807|Homo sapiens VSGP/F-spondin protein. 70 8e-12
AB018305-1|BAA34482.2| 724|Homo sapiens KIAA0762 protein protein. 70 8e-12
U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein. 34 0.48
AC073208-1|AAP22355.1| 44|Homo sapiens unknown protein. 34 0.64
>AK074803-1|BAC11217.1| 807|Homo sapiens protein ( Homo sapiens
cDNA FLJ90322 fis, clone NT2RP2001755, highly similar to
Rattus norvegicus f-spondin mRNA. ).
Length = 807
Score = 70.1 bits (164), Expect = 8e-12
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Frame = +3
Query: 249 GLKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 428
G +I N + + G FQ+ + T+F C +V E+ +T +QV W APP
Sbjct: 92 GFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPP 151
Query: 429 AGSGCVLLKAMVYENASSLVR*RRSVDKRICEDTSLVHPXXXXXXXXXI*DGVR------ 590
AG+GCV+LKA + + + S+ K++CE S G
Sbjct: 152 AGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTF 211
Query: 591 -GLWSPQTHPKNFPTPSSVANHFS 659
G WS +THPK++P ANH+S
Sbjct: 212 YGNWSEKTHPKDYPRR---ANHWS 232
Score = 33.5 bits (73), Expect = 0.84
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Frame = +1
Query: 466 MKMRVRWFAEDGQLTN-----ESARTRLWSIP--DCCACDDAKYRMVFEGSGLRK 609
++ R+ +F ++G LT +S + P DCCAC AKYR+ F G+ K
Sbjct: 164 VQKRIIYFQDEGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTFYGNWSEK 218
>AB051390-1|BAB18461.1| 807|Homo sapiens VSGP/F-spondin protein.
Length = 807
Score = 70.1 bits (164), Expect = 8e-12
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Frame = +3
Query: 249 GLKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 428
G +I N + + G FQ+ + T+F C +V E+ +T +QV W APP
Sbjct: 92 GFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPP 151
Query: 429 AGSGCVLLKAMVYENASSLVR*RRSVDKRICEDTSLVHPXXXXXXXXXI*DGVR------ 590
AG+GCV+LKA + + + S+ K++CE S G
Sbjct: 152 AGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTF 211
Query: 591 -GLWSPQTHPKNFPTPSSVANHFS 659
G WS +THPK++P ANH+S
Sbjct: 212 YGNWSEKTHPKDYPRR---ANHWS 232
Score = 33.5 bits (73), Expect = 0.84
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Frame = +1
Query: 466 MKMRVRWFAEDGQLTN-----ESARTRLWSIP--DCCACDDAKYRMVFEGSGLRK 609
++ R+ +F ++G LT +S + P DCCAC AKYR+ F G+ K
Sbjct: 164 VQKRIIYFQDEGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTFYGNWSEK 218
>AB018305-1|BAA34482.2| 724|Homo sapiens KIAA0762 protein protein.
Length = 724
Score = 70.1 bits (164), Expect = 8e-12
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Frame = +3
Query: 249 GLKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPP 428
G +I N + + G FQ+ + T+F C +V E+ +T +QV W APP
Sbjct: 9 GFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPP 68
Query: 429 AGSGCVLLKAMVYENASSLVR*RRSVDKRICEDTSLVHPXXXXXXXXXI*DGVR------ 590
AG+GCV+LKA + + + S+ K++CE S G
Sbjct: 69 AGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTF 128
Query: 591 -GLWSPQTHPKNFPTPSSVANHFS 659
G WS +THPK++P ANH+S
Sbjct: 129 YGNWSEKTHPKDYPRR---ANHWS 149
Score = 33.5 bits (73), Expect = 0.84
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Frame = +1
Query: 466 MKMRVRWFAEDGQLTN-----ESARTRLWSIP--DCCACDDAKYRMVFEGSGLRK 609
++ R+ +F ++G LT +S + P DCCAC AKYR+ F G+ K
Sbjct: 81 VQKRIIYFQDEGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTFYGNWSEK 135
>U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.
Length = 3460
Score = 34.3 bits (75), Expect = 0.48
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 357 CTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASSLVR*RRSVDKRICE 524
C+ LP T + +W APPAG+GCV A + + ++ +++CE
Sbjct: 126 CSVVASHVSHLPTTNLSFIWIAPPAGTGCVNFMATATHRGQVIF--KDALAQQLCE 179
>AC073208-1|AAP22355.1| 44|Homo sapiens unknown protein.
Length = 44
Score = 33.9 bits (74), Expect = 0.64
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 357 CTNSVVEADDLPKTEVQVMWKAPPAGSGCV 446
C+ LP T + +W APPAG+GCV
Sbjct: 13 CSVVASHVSHLPTTNLSFIWIAPPAGTGCV 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,824,574
Number of Sequences: 237096
Number of extensions: 2912503
Number of successful extensions: 8213
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8213
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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