Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0284.Seq
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical pr... 114 6e-26
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 30 1.6
Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 29 3.6
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 29 3.6
U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of a... 29 4.8
AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein. 29 4.8
AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans alpha-1->3-fu... 28 6.3
AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl trans... 28 6.3
>U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical
protein B0286.3 protein.
Length = 423
Score = 114 bits (275), Expect = 6e-26
Identities = 51/83 (61%), Positives = 63/83 (75%)
Frame = +1
Query: 256 NHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDMKIEF 435
N DPQW++EQI+S + L IGR+E+ M+K T L+F LEK WAL + ALIDMKIEF
Sbjct: 139 NDDPQWTDEQIVSNGLMIDHLKIGREEISLMKKMTKLVFRALEKGWALSNSALIDMKIEF 198
Query: 436 GVDTEGSIVLADVIDSDSWRLWP 504
GV EG I+LADVID+DSWR+WP
Sbjct: 199 GVTVEGEILLADVIDNDSWRVWP 221
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/76 (60%), Positives = 54/76 (71%)
Frame = +2
Query: 41 NLTNIITISGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFT 220
N+ + + G+ T F K SET F+++KC MIPIEWV RR+ATGSFLKRNPGV EGFRF
Sbjct: 67 NVFEYLQLLGLPTHFEKSISETEFVARKCTMIPIEWVARRVATGSFLKRNPGVKEGFRFN 126
Query: 221 PPKQETFFKDDETTIP 268
K ETFFKDD P
Sbjct: 127 DLKLETFFKDDANDDP 142
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 512 ITEGHNLQESESMTSA-NTMLPSVSTPNSIFMSISAQSRRAQAFSKISNIRIVAFLM*ST 336
+T N +++S+T +T P + TP++ S +A + ++ +S +I A M T
Sbjct: 3306 VTPKKNTAQTQSLTVLESTSSPELLTPSNPETSNTASTSSSKQPKSLSEEKITATQMIQT 3365
Query: 335 SSRPIRR 315
RPIR+
Sbjct: 3366 RGRPIRK 3372
>Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical
protein ZK1251.8 protein.
Length = 568
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = +2
Query: 104 TAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFTPPKQETFFKDDETTIPNGQRS 283
T F KC+ E + L + + N +PEG+ P K+ ++++ I
Sbjct: 100 TLFHDTKCDPYSFEHLNIELIDRCYAEANVPIPEGYGGQPRKKIKNKEEEKDVIDETPAE 159
Query: 284 KSFQPNSIITVF*SVAT 334
K NS+I F + T
Sbjct: 160 KWSIGNSVIFAFTVITT 176
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 131 MIPIEWVTRRLATGSFLKRNPGVPE 205
M+P++W +R A+ S R+PG PE
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 131 MIPIEWVTRRLATGSFLKRNPGVPE 205
M+P++W +R A+ S R+PG PE
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302
>U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of
activated let-60ras protein 5 protein.
Length = 700
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +1
Query: 262 DPQWSEEQIISAKFNYNGL-LIGRDEVDY----MRKATILIFEILEKAWALRDCALIDMK 426
+P W+ + + G+ ++GR + +R T I+ ++EK + DC +
Sbjct: 547 EPFWAHGDFVRVNHSTGGVEMLGRSDATLNRGGVRIGTAEIYSVVEKIPHIADCIVAGRL 606
Query: 427 IEFGVDTE 450
+E G+D E
Sbjct: 607 VEEGMDEE 614
>AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein.
Length = 700
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +1
Query: 262 DPQWSEEQIISAKFNYNGL-LIGRDEVDY----MRKATILIFEILEKAWALRDCALIDMK 426
+P W+ + + G+ ++GR + +R T I+ ++EK + DC +
Sbjct: 547 EPFWAHGDFVRVNHSTGGVEMLGRSDATLNRGGVRIGTAEIYSVVEKIPHIADCIVAGRL 606
Query: 427 IEFGVDTE 450
+E G+D E
Sbjct: 607 VEEGMDEE 614
>AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans
alpha-1->3-fucosyltransferase homologueprotein.
Length = 382
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 19 PCSDECLEPYKYNHHFRNQNCL 84
PC E +EPYK+ N NC+
Sbjct: 235 PCVRELIEPYKFYLALENSNCV 256
>AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl
transferase protein 4 protein.
Length = 382
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 19 PCSDECLEPYKYNHHFRNQNCL 84
PC E +EPYK+ N NC+
Sbjct: 235 PCVRELIEPYKFYLALENSNCV 256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,134,688
Number of Sequences: 27780
Number of extensions: 360470
Number of successful extensions: 784
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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