BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0283.Seq
(770 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 31 0.039
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 29 0.12
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 27 0.64
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.85
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 26 1.1
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 26 1.1
DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist mic... 25 2.0
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 25 2.6
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 25 3.4
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 25 3.4
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 24 4.5
AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A... 24 4.5
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 23 7.9
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 31.1 bits (67), Expect = 0.039
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Frame = +2
Query: 5 SKDVEALHRQIDELQQANDKLDKSKKKLQAELEDTNI-ELEAQRAKVMELEKKQKSFDKV 181
S+ E R +LQ+A D+ + E +D + ELEAQRA+V ++++ ++
Sbjct: 1057 SRICEGAKRITAQLQRAWDEERAALAVNVIERQDEDAAELEAQRAEVRRARNERRNANRR 1116
Query: 182 VA------EERAVAEGTPP------------REIRRSTRPGRRDQGALSDQGIR*CCRED 307
A E RA TPP RE + R RR++ L G +D
Sbjct: 1117 AATARRREERRAGLPPTPPASPRTAQRRAALRERQARFRERRRNRRLLGMSGQAINNDDD 1176
Query: 308 RRARTDEASAPSGV 349
R R D A+ PSG+
Sbjct: 1177 GRERADLAAGPSGM 1190
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 29.5 bits (63), Expect = 0.12
Identities = 30/96 (31%), Positives = 44/96 (45%)
Frame = +3
Query: 309 EELERTKRVLQAEWHELANSQGTADKNVHELERAKRALESQLAELHAQNEEIEDDLQLTE 488
EEL+ KR LQ E ++GTA V ELE ALE+QL + A+ EE + + +
Sbjct: 171 EELKE-KRSLQ-EKSTNQGAEGTA--RVRELEARLEALEAQLQSMRAR-EEFQQQIHVCM 225
Query: 489 DAKLRLRVNMQGHARAVSSATCRLKKNKGEEKRSRH 596
K L + + +L K EEK ++
Sbjct: 226 ARKAWLEYEELFLLYSATLKDLKLAKKCTEEKEQQY 261
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 27.1 bits (57), Expect = 0.64
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 15/121 (12%)
Frame = +3
Query: 276 TRELDDAAEKIEELERTKRVLQAEWHELANSQGTAD-------------KNVHELERAKR 416
TRELD KI E+ER + + ++ S + N+ + E +
Sbjct: 750 TRELDQIGPKISEIERRMQQRDMKIQDIKESMNNVEDDVYAEFCARIGVANIRQFEEREL 809
Query: 417 ALESQLAELHAQNEEIEDDL--QLTEDAKLRLRVNMQGHARAVSSATCRLKKNKGEEKRS 590
L+ + A+ A+ E+ D + L + N+Q RAV L+ K E R
Sbjct: 810 VLQQERAKKRAEFEQQIDRINNNLEFERSKDTSKNVQRWERAVQDDEDSLETFKQAEARQ 869
Query: 591 R 593
R
Sbjct: 870 R 870
Score = 25.4 bits (53), Expect = 2.0
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 38 DELQQANDKLDKSKKKLQA---ELEDTNIELEAQRAKVMELEKKQKSFDKVVAE 190
+ L+ + + L+ SKK + +LED EL+ K+ E+E++ + D + +
Sbjct: 723 NRLKYSMNDLETSKKNINEYDRQLEDFTRELDQIGPKISEIERRMQQRDMKIQD 776
Score = 23.8 bits (49), Expect = 6.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 315 LERTKRVLQAEWHELANSQGTADKNVHELERAKRALESQLAELHAQNEE 461
LE KR+ EL+ GT+ + +HEL+ + QL + E
Sbjct: 459 LEEQKRIKA----ELSQDVGTSKERIHELQSELDNVREQLGDAKIDKHE 503
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 26.6 bits (56), Expect = 0.85
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 545 RDLQAKEEQGRGEAFAAFVKQLRDVETELEEERNSEPPRFAQREEASR 688
R + +EE+ EA A ++ R+ E EL E+R E QRE+ R
Sbjct: 448 RAARLREEERAREAREAAIE--REKERELREQREREQREKEQREKEQR 493
Score = 25.0 bits (52), Expect = 2.6
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 533 RSFERDLQAKEEQGRGEAFAAFVKQLRDVETELEEERNSEPPRFAQREEASRADLKDAEQ 712
R ER+L+ + E+ + E K+ R+ E +EER + QRE R ++ E
Sbjct: 468 REKERELREQREREQRE------KEQREKEQREKEERERQQREKEQREREQREKEREREA 521
Query: 713 A 715
A
Sbjct: 522 A 522
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 26.2 bits (55), Expect = 1.1
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKKLQAELEDTNIELEAQRAKVMELEKKQKSFDKV 181
+ +VEA I + +L++ KL+ ELE+ + +E ++K+ + K
Sbjct: 940 MEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKR 999
Query: 182 VAE 190
AE
Sbjct: 1000 EAE 1002
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.2 bits (55), Expect = 1.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 5 SKDVEALHRQIDELQQANDKLDKSKKKLQAELEDTNIELEAQRAKVMELEKKQKSFD 175
S D E L + +E +A+++ + ++E D ELE R ELE++Q+ D
Sbjct: 74 SPDEEHLEEEQEEEAEADEEEADESESEESEESD---ELEEARLVAEELEERQQELD 127
>DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist
michelob_x protein.
Length = 201
Score = 25.4 bits (53), Expect = 2.0
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 285 LDDAAEKIEELERTKRVLQAEWHELANSQGTADKNVHELERAKRALESQLAEL 443
LDD AE + L++ + VLQ ++ L Q ++ + + + ALE Q A +
Sbjct: 10 LDDEAENLRLLQQQQMVLQRQY--LLQQQYHLQAQLNLVHQQQLALEQQSAAI 60
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 25.0 bits (52), Expect = 2.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 399 LERAKRALESQLAELHAQNEEIEDDL 476
+ A R L + LAE +A+NE I ++L
Sbjct: 1 MREAIRQLTNSLAEANARNERINEEL 26
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 24.6 bits (51), Expect = 3.4
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 5 SKDVEALHRQIDELQQANDKLDKSKKKLQAELEDTNIELEAQRA 136
SK +E +H +DE+ + + K +L E+E I+++ RA
Sbjct: 194 SKMIEIMH--LDEITTPEEVAESVKAQLNIEIEIDRIKMKKGRA 235
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 24.6 bits (51), Expect = 3.4
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 302 EDRRARTDEASAPSGVARAGQ--LARHGRQERP 394
E RRAR D +A ARA Q L R GR P
Sbjct: 1039 EIRRARNDRRNASRRAARARQRELQRAGRPPSP 1071
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.2 bits (50), Expect = 4.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 261 RVLSLTRELDDAAEKIEELERTKRVLQAEWHELANS 368
RV R + AA ++EE +RT + Q++W A++
Sbjct: 919 RVNDPGRSITKAAIRLEERQRTITMWQSQWDAEADT 954
>AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A2
protein.
Length = 496
Score = 24.2 bits (50), Expect = 4.5
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 494 QAAASGQHAGPCARSFERDLQAKEEQGRGEAFAAFVKQLRDVETELEEERNSEPPRFAQR 673
Q AA+ A P E + E + +A V+++RD ++++ S+ PRF R
Sbjct: 4 QTAAAAAPADPIV-DVEMESAEDAEAAKKDAELLAVQEIRDHARQIDKAVVSKEPRFILR 62
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 23.4 bits (48), Expect = 7.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 592 RERFSSPLFFFSLQVAL 542
R+R ++PLF ++L VAL
Sbjct: 131 RDRLNAPLFQYALSVAL 147
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,527
Number of Sequences: 2352
Number of extensions: 6971
Number of successful extensions: 38
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -