Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0283.Seq
         (770 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   3.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.6  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 620 ETELEEERNSEPPRFAQREEASRADLKDAEQALAT 724
           +++ E   NS+PPR       SR D   +E +LAT
Sbjct: 80  DSDEEYAANSQPPRITSVPNTSRLD--KSEISLAT 112


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +2

Query: 80  KKLQAELEDTNIELEAQRAKVMELEKKQKSFDK 178
           KKLQ +   + +++   + + + ++K    FDK
Sbjct: 435 KKLQPQYSQSELQMPGVKFESVNIDKLYTYFDK 467


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +2

Query: 80  KKLQAELEDTNIELEAQRAKVMELEKKQKSFDK 178
           KKLQ +   + +++   + + + ++K    FDK
Sbjct: 435 KKLQPQYSQSELQMPGVKFESVNIDKLYTYFDK 467


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,353
Number of Sequences: 438
Number of extensions: 1917
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)