Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0281.Seq
(757 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D5716C Cluster: PREDICTED: similar to Nuclear po... 73 6e-12
UniRef50_UPI0000DB7305 Cluster: PREDICTED: similar to Nuclear po... 73 8e-12
UniRef50_Q12769-2 Cluster: Isoform 2 of Q12769 ; n=3; Amniota|Re... 53 7e-06
UniRef50_Q12769 Cluster: Nuclear pore complex protein Nup160; n=... 53 7e-06
UniRef50_Q4S160 Cluster: Chromosome 13 SCAF14769, whole genome s... 52 2e-05
UniRef50_Q9VKJ3 Cluster: Nuclear pore complex protein Nup160 hom... 52 2e-05
UniRef50_A7RI65 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.004
UniRef50_Q17II0 Cluster: Putative uncharacterized protein; n=2; ... 42 0.022
UniRef50_UPI0000E46B0E Cluster: PREDICTED: similar to Nucleopori... 41 0.038
UniRef50_A5KUI0 Cluster: Putative uncharacterized protein; n=10;... 34 4.4
UniRef50_UPI0000E80500 Cluster: PREDICTED: nucleoporin 160kDa; n... 33 7.6
>UniRef50_UPI0000D5716C Cluster: PREDICTED: similar to Nuclear pore
complex protein Nup160 homolog; n=2; Coelomata|Rep:
PREDICTED: similar to Nuclear pore complex protein
Nup160 homolog - Tribolium castaneum
Length = 1388
Score = 73.3 bits (172), Expect = 6e-12
Identities = 36/92 (39%), Positives = 54/92 (58%)
Frame = +2
Query: 227 QITAKSRRLRYKDSTKFYTRNRFIYWQTTSDAIEIXXXXXXXXXXXXXXRCKVAPGTPPL 406
++ ++ Y+DST+ +TRNRFIYW+ + D +E+ R K TP L
Sbjct: 39 KVAERANGFCYRDSTRHHTRNRFIYWRISHDVLELVEHSLDINLAGNRIRYKFV-DTPIL 97
Query: 407 SNITVYERSSTNNVVILAATVSSVHRLVFPHP 502
++++E + +NVV+L TV SVHRLVFPHP
Sbjct: 98 DGVSIHE--TYDNVVVLVPTVCSVHRLVFPHP 127
Score = 54.8 bits (126), Expect = 2e-06
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +3
Query: 114 LEAMPVTFKEIAPNHNIPEKWKEIVLNTGGTHSTLQDIKLPQKAGGYGIR 263
++ + + ++E+ P+ + + W+EI LNTGGT TLQDIK+ ++A G+ R
Sbjct: 1 MQEIALGYREVIPDQTVSDPWREITLNTGGTQGTLQDIKVAERANGFCYR 50
>UniRef50_UPI0000DB7305 Cluster: PREDICTED: similar to Nuclear pore
complex protein Nup160 homolog; n=1; Apis mellifera|Rep:
PREDICTED: similar to Nuclear pore complex protein
Nup160 homolog - Apis mellifera
Length = 1348
Score = 72.9 bits (171), Expect = 8e-12
Identities = 38/89 (42%), Positives = 52/89 (58%)
Frame = +2
Query: 257 YKDSTKFYTRNRFIYWQTTSDAIEIXXXXXXXXXXXXXXRCKVAPGTPPLSNITVYERSS 436
Y D +K++TRNRFIYW+ D +E+ R K TP L I+++E +
Sbjct: 49 YNDGSKYFTRNRFIYWRICHDVLELVEHSLDINLANCRVRYKFTD-TPILDGISIHE--T 105
Query: 437 TNNVVILAATVSSVHRLVFPHPSI*XKSV 523
N+V+IL ATVSSVH+L FPHP K+V
Sbjct: 106 INSVIILIATVSSVHKLSFPHPERIHKNV 134
Score = 67.3 bits (157), Expect = 4e-10
Identities = 26/47 (55%), Positives = 37/47 (78%)
Frame = +3
Query: 114 LEAMPVTFKEIAPNHNIPEKWKEIVLNTGGTHSTLQDIKLPQKAGGY 254
+E + ++E+ P+ +PEKW EI LNTGG+ STLQDIK+P++AGGY
Sbjct: 1 MEEFLLGYREVVPDQTVPEKWNEIKLNTGGSQSTLQDIKVPERAGGY 47
>UniRef50_Q12769-2 Cluster: Isoform 2 of Q12769 ; n=3; Amniota|Rep:
Isoform 2 of Q12769 - Homo sapiens (Human)
Length = 190
Score = 53.2 bits (122), Expect = 7e-06
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Frame = +2
Query: 257 YKDSTKFY--TRNRFIYWQTTSDAIEIXXXXXXXXXXXXXXR-----CKVAPGTPPLSNI 415
Y +S K + TRNRFI+W+T+ D +E+ R C V PG
Sbjct: 54 YVESGKLFSVTRNRFIHWKTSGDTLELMEESLDINLLNNAIRLKFQNCSVLPGG------ 107
Query: 416 TVYERSSTNNVVILAATVSSVHRLVFPHPSI*XKSV 523
VY + N V+IL T +VHRL+ PHPS +SV
Sbjct: 108 -VYVSETQNRVIILMLTNQTVHRLLLPHPSRMYRSV 142
>UniRef50_Q12769 Cluster: Nuclear pore complex protein Nup160; n=32;
Euteleostomi|Rep: Nuclear pore complex protein Nup160 -
Homo sapiens (Human)
Length = 1316
Score = 53.2 bits (122), Expect = 7e-06
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Frame = +2
Query: 257 YKDSTKFY--TRNRFIYWQTTSDAIEIXXXXXXXXXXXXXXR-----CKVAPGTPPLSNI 415
Y +S K + TRNRFI+W+T+ D +E+ R C V PG
Sbjct: 54 YVESGKLFSVTRNRFIHWKTSGDTLELMEESLDINLLNNAIRLKFQNCSVLPGG------ 107
Query: 416 TVYERSSTNNVVILAATVSSVHRLVFPHPSI*XKSV 523
VY + N V+IL T +VHRL+ PHPS +SV
Sbjct: 108 -VYVSETQNRVIILMLTNQTVHRLLLPHPSRMYRSV 142
>UniRef50_Q4S160 Cluster: Chromosome 13 SCAF14769, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF14769, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1558
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 YKDSTKFY--TRNRFIYWQTTSDAIEIXXXXXXXXXXXXXXRCKVAPGTPPLSNITVYER 430
Y+DS K T NRFI+W T+ D +++ + K + T +++ E
Sbjct: 52 YEDSGKLLSVTSNRFIHWSTSGDTVQLVEQSLDTNLLNNGVKLKFSHCTVLPGGVSIQE- 110
Query: 431 SSTNNVVILAATVSSVHRLVFPHPS 505
+ NNVVIL T SVHRLV HP+
Sbjct: 111 -TLNNVVILICTNQSVHRLVLAHPT 134
>UniRef50_Q9VKJ3 Cluster: Nuclear pore complex protein Nup160
homolog; n=3; Sophophora|Rep: Nuclear pore complex
protein Nup160 homolog - Drosophila melanogaster (Fruit
fly)
Length = 1411
Score = 52.0 bits (119), Expect = 2e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +2
Query: 257 YKDSTKFYTRNRFIYWQTTSDAIEIXXXXXXXXXXXXXXRCKVAPGTPPLSNITVYERSS 436
YK++ TRNRFIYW+T D +E+ R + + N+++ E+ +
Sbjct: 52 YKNTKNVQTRNRFIYWRTYQDVLELSEVSLDISLQRNHLRLRFTDSA--VLNVSLTEQGT 109
Query: 437 TNNVVILAATVSSVHRLVFP 496
+V +L TVSSVHR VFP
Sbjct: 110 --SVTLLVVTVSSVHRYVFP 127
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +3
Query: 129 VTFKEIAPNHNIPEKWKEIVLNTGGTHSTLQDIKLPQKAGGY 254
++++E+ P + P +W E+ +NTG T STLQD+K + +GGY
Sbjct: 10 MSYREVIPRNLSPAEWIEVKINTG-TQSTLQDLKTFETSGGY 50
>UniRef50_A7RI65 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 141
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 404 LSNITVYERSSTNNVVILAATVSSVHRLVFPHP 502
L ++VYE S NV++L AT +SVHRLVFPHP
Sbjct: 33 LPKVSVYE--SAGNVILLIATTTSVHRLVFPHP 63
>UniRef50_Q17II0 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1321
Score = 41.5 bits (93), Expect = 0.022
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +3
Query: 123 MPVTFKEIAPNH--NIPEKWKEIVLNTGGTHSTLQDIKLPQKAGGY 254
+PV ++E+ + W+EI ++TGG H+ LQD+K ++ GGY
Sbjct: 5 VPVQYREVPMRQLFSNASSWREINVSTGGIHNMLQDVKTSEQCGGY 50
Score = 39.9 bits (89), Expect = 0.066
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 278 YTRNRFIYWQTTSDAIEIXXXXXXXXXXXXXXRCKVAPGTPPLSNITVYERSSTNNVVIL 457
+ NRFIYW+T D+I + K+ P+ ++ + + V IL
Sbjct: 58 FRSNRFIYWRTCRDSIFLSEVSMNLNLTKN--NLKIGFDESPILSVDI--SGNQMQVFIL 113
Query: 458 AATVSSVHRLVFPHPSI 508
TV+SVHR+V HP +
Sbjct: 114 IVTVTSVHRIVLRHPKV 130
>UniRef50_UPI0000E46B0E Cluster: PREDICTED: similar to Nucleoporin
160, partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Nucleoporin 160, partial -
Strongylocentrotus purpuratus
Length = 146
Score = 40.7 bits (91), Expect = 0.038
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +2
Query: 392 GTPPLSNITVYERSSTNNVVILAATVSSVHRLVFPHPS 505
G+P + ++++E S +VV+L AT +SVHRL FPHP+
Sbjct: 29 GSPIIPRVSIHETHS--HVVVLIATFTSVHRLPFPHPN 64
>UniRef50_A5KUI0 Cluster: Putative uncharacterized protein; n=10;
Proteobacteria|Rep: Putative uncharacterized protein -
Vibrionales bacterium SWAT-3
Length = 753
Score = 33.9 bits (74), Expect = 4.4
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 206 SQYFTRHQITAKSRRLRYKDSTKFYTRNRFIYWQTTSD 319
S+ T +Q+TA SR + +D+T+ T+N+ + WQ SD
Sbjct: 202 SEMNTNNQVTAWSRLVTSEDNTENMTQNQAVSWQVPSD 239
>UniRef50_UPI0000E80500 Cluster: PREDICTED: nucleoporin 160kDa; n=1;
Gallus gallus|Rep: PREDICTED: nucleoporin 160kDa -
Gallus gallus
Length = 1223
Score = 33.1 bits (72), Expect = 7.6
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 440 NNVVILAATVSSVHRLVFPHPS 505
N++V+L TV SVHR++ PHP+
Sbjct: 51 NHLVLLLVTVQSVHRVLLPHPA 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,100,942
Number of Sequences: 1657284
Number of extensions: 13281305
Number of successful extensions: 29129
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29105
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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