Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0281.Seq
         (757 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0145 + 7067521-7068993                                           31   1.3  
01_06_1124 - 34679205-34680926,34681438-34682811                       29   3.0  
01_07_0313 + 42681902-42681950,42682800-42682935,42683399-426835...    28   9.2  

>05_02_0145 + 7067521-7068993
          Length = 490

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 632 GVAPYMFFTASWKMVKLYLH 691
           GV  YMFFT+ W ++ L+LH
Sbjct: 148 GVPFYMFFTSPWMLLSLFLH 167


>01_06_1124 - 34679205-34680926,34681438-34682811
          Length = 1031

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 580  NNPNNYFIL-NQYSNGHHWSSPIHVLHCFVE 669
            +N  NY +L N Y++ H WS  ++V  C  +
Sbjct: 986  SNSGNYTLLSNAYASAHRWSEAMNVRQCMAD 1016


>01_07_0313 +
           42681902-42681950,42682800-42682935,42683399-42683501,
           42683514-42683621,42684274-42684513,42684819-42684951,
           42685038-42685219,42685506-42685618,42687450-42687555
          Length = 389

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +3

Query: 135 FKEIAPNHNIPEKWKEIVLNTGGTHSTLQDIKLPQKAGGYGIRIQRSSTPGIAL 296
           FKEIA  HN+P + + +V N  G  ST+     P  A G GIR      P +++
Sbjct: 305 FKEIARLHNLPVQ-EFVVRNDMGCGSTIG----PILASGVGIRTVDCGIPQLSM 353


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,572,462
Number of Sequences: 37544
Number of extensions: 364229
Number of successful extensions: 688
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)