BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0281.Seq (757 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_58950| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07 SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.3 SB_6969| Best HMM Match : Astacin (HMM E-Value=0) 29 4.1 SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16) 28 9.4 >SB_58950| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 513 Score = 52.8 bits (121), Expect = 3e-07 Identities = 28/74 (37%), Positives = 39/74 (52%) Frame = +2 Query: 281 TRNRFIYWQTTSDAIEIXXXXXXXXXXXXXXRCKVAPGTPPLSNITVYERSSTNNVVILA 460 T NRFI W+ + +E+ + + G L ++VYE S NV++L Sbjct: 61 TNNRFILWKINDNILELSEYSLDVNLSGNRIQLRFTDGKL-LPKVSVYE--SAGNVILLI 117 Query: 461 ATVSSVHRLVFPHP 502 AT +SVHRLVFPHP Sbjct: 118 ATTTSVHRLVFPHP 131 >SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 1858 Score = 30.7 bits (66), Expect = 1.3 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = -3 Query: 164 NIMIWSNLLERDRHSFKKFHGELCNTKAPKSDILVNQLK 48 NI W+NL ++ KK+HGE+ N + S+ + N+L+ Sbjct: 1707 NIKYWTNLRSKEEALSKKWHGEIFNDQRKNSNEM-NKLR 1744 >SB_6969| Best HMM Match : Astacin (HMM E-Value=0) Length = 225 Score = 29.1 bits (62), Expect = 4.1 Identities = 10/28 (35%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -3 Query: 158 MIWSNLLERDRHSFKKF-HGELCNTKAP 78 ++WSN+ E ++H+F+K+ HG + + P Sbjct: 142 IVWSNIKEENKHNFEKYNHGVIDSLGVP 169 >SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16) Length = 724 Score = 27.9 bits (59), Expect = 9.4 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 114 LEAMPVTFKEIAPNHNIPEKWKEIVLNTGG 203 LE++P +FK + N+ P++W V+N GG Sbjct: 260 LESLPYSFKGVDVNNKQPKEW---VINPGG 286 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,561,602 Number of Sequences: 59808 Number of extensions: 425653 Number of successful extensions: 813 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 727 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 812 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2058295707 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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