Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0281.Seq
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016420-5|AAB65309.1|  651|Caenorhabditis elegans Na/ca exchang...    31   1.2  
AC024881-5|AAK71415.1|  668|Caenorhabditis elegans Na/ca exchang...    30   1.5  
AF038608-6|AAT92088.1|  312|Caenorhabditis elegans Serpentine re...    29   3.6  
AC024857-1|AAK31566.2|  869|Caenorhabditis elegans Temporarily a...    29   3.6  
Z81557-5|CAB04533.1|  345|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AF038608-2|AAU05595.1|  297|Caenorhabditis elegans Serpentine re...    28   8.2  
AF016420-4|AAB65308.1|  703|Caenorhabditis elegans Na/ca exchang...    28   8.2  

>AF016420-5|AAB65309.1|  651|Caenorhabditis elegans Na/ca exchangers
           protein 9 protein.
          Length = 651

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 586 PNNYFILNQYSNGHHWSSPIHVLHCFVENGEAIFAL 693
           P  +F L   SN   W  P+ +LHCF     A+F++
Sbjct: 411 PVFFFKLTVPSNEMSWCKPLFILHCFASIQFALFSI 446


>AC024881-5|AAK71415.1|  668|Caenorhabditis elegans Na/ca exchangers
           protein 10 protein.
          Length = 668

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 586 PNNYFILNQYSNGHHWSSPIHVLHCFVENGEAIFAL 693
           P  +  L   SN   WS PI ++HCF     A+FA+
Sbjct: 411 PTFFLKLTIPSNEMPWSKPILIIHCFCSIQLALFAV 446


>AF038608-6|AAT92088.1|  312|Caenorhabditis elegans Serpentine
           receptor, class z protein82 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 230 ITAKSRRLRYKDSTKFYTRNRFIYWQTTSDAI 325
           I   +RR  Y  S  +Y+  ++IYWQT +  I
Sbjct: 205 ILRSARRNPYVTSGHYYSLQKYIYWQTLTSLI 236


>AC024857-1|AAK31566.2|  869|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 305 protein.
          Length = 869

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 389 PGTPPLSNITVYERSSTNNVVILAA-TVSSVHRLVFPHPSI 508
           P  PP   +T +  +   NVVI+AA    +V R++F  PS+
Sbjct: 293 PNPPPTQKLTAFTWAHNGNVVIIAAGGCLTVGRILFGVPSL 333


>Z81557-5|CAB04533.1|  345|Caenorhabditis elegans Hypothetical
           protein F59A1.10 protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +2

Query: 635 VAPY-MFFTASWKMVKLYLHWHL-GHEGXGQFGTL*NW 742
           VAP+ +FFT  W ++ LY  W+L   E   + G   NW
Sbjct: 47  VAPFVLFFTGQWIILGLYAVWYLYDRESPRRGGYRDNW 84


>Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical
           protein ZK897.1 protein.
          Length = 1396

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -3

Query: 188 YNFFPFLWNIMIWSNLLERDRHSFKKFHGELCNTKAPKSDIL 63
           ++F  F+WNIM+ ++  E +   F++ H  L   +  K  +L
Sbjct: 34  FSFAVFVWNIMLGASSSEEEDDDFQEDHDSLPIAQVKKRSLL 75


>AF038608-2|AAU05595.1|  297|Caenorhabditis elegans Serpentine
           receptor, class z protein70 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 230 ITAKSRRLRYKDSTKFYTRNRFIYWQT 310
           I  K R+L Y DST+  T   +I+W T
Sbjct: 196 IMKKMRKLAYLDSTQLNTLYTYIFWLT 222


>AF016420-4|AAB65308.1|  703|Caenorhabditis elegans Na/ca exchangers
           protein 8 protein.
          Length = 703

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 586 PNNYFILNQYSNGHHWSSPIHVLHCFVENGEAIFAL 693
           P+ +  +   SN   W  P+ +LHCF     A+F++
Sbjct: 463 PSFFMKMTIPSNEMSWCKPLFLLHCFASIQFALFSI 498


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,331,268
Number of Sequences: 27780
Number of extensions: 330299
Number of successful extensions: 782
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)