Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0280.Seq
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 36 0.024
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z75530-4|CAA99794.2| 357|Caenorhabditis elegans Hypothetical pr... 30 2.1
U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical pr... 29 2.7
U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical pr... 29 2.7
U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical pr... 28 6.3
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 28 6.3
AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical... 28 6.3
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 8.4
AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical... 28 8.4
AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical... 28 8.4
AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical... 28 8.4
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 136 FRVSSTESDGQYT--KCHLCYTVKRNFYCTDCIKEGNFVHSSCLIRTD 273
F+VSS S + +C C T +RN CT+CI+ + HS L+R D
Sbjct: 847 FKVSSNNSFPMHNFYRCTTCNTTERNAICTNCIRTCHRGHSVELVRFD 894
>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical
protein F29D11.2 protein.
Length = 1153
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 330 DRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSELKTYNTELAL 509
D+C + L++ S L K R+KI++L L + N+ KE+ LK + L+
Sbjct: 315 DKCLNVRVAALEQFSNLRPNKHVREKIEMLDLCLKDHEVNIRDAAKEV--LKNWVRNLST 372
Query: 510 RASKISEKGSKS 545
R S+ S+K S
Sbjct: 373 RWSE-SQKSKDS 383
>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical
protein F29D11.2 protein.
Length = 1153
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 330 DRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSELKTYNTELAL 509
D+C + L++ S L K R+KI++L L + N+ KE+ LK + L+
Sbjct: 315 DKCLNVRVAALEQFSNLRPNKHVREKIEMLDLCLKDHEVNIRDAAKEV--LKNWVRNLST 372
Query: 510 RASKISEKGSKS 545
R S+ S+K S
Sbjct: 373 RWSE-SQKSKDS 383
>Z75530-4|CAA99794.2| 357|Caenorhabditis elegans Hypothetical
protein C47E8.6 protein.
Length = 357
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 366 KDSLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSELKTYNTELALR 512
+DS+ + R+K+ + + Q ++N+D KE++ L+ Y +R
Sbjct: 298 RDSISADLIDSREKLKDQAVLLGQNQANIDEMSKEIARLQDYKRNFQVR 346
>U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical
protein F57B9.7b protein.
Length = 373
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 330 DRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSELKT 488
D ++L KLK L E + + ++ + + +SN D KEL ELKT
Sbjct: 279 DAAKQLAEMKLKMQDLERENTNQQGNVIRMEGQMKRYKSNADVAEKELDELKT 331
>U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical
protein F57B9.7a protein.
Length = 353
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 330 DRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSELKT 488
D ++L KLK L E + + ++ + + +SN D KEL ELKT
Sbjct: 259 DAAKQLAEMKLKMQDLERENTNQQGNVIRMEGQMKRYKSNADVAEKELDELKT 311
>U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical
protein F42C5.3 protein.
Length = 250
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 312 NRKHILDRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSELKTY 491
+ K DR R K KK+ E K +++ DL + +N N+D + +EL
Sbjct: 21 SEKETFDRKRRETLEKHKKELDELEKKNKKEEDDLREQNMNLWNKNLDQQIALGNELNNK 80
Query: 492 NTELALRASKISEK 533
TE++ + S++ K
Sbjct: 81 YTEISNQNSRLQIK 94
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +3
Query: 267 DRYSEKLSKLLRLKMNRKHILDRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRS 446
D++ K +LL + + D ++ A KL K L + K C++++D + L I+++
Sbjct: 516 DKWMVKQKELL---IKARTSTDETDKKNATKLVKH-LHKKIKACKEEVDGILLKISEKSM 571
Query: 447 NVDXKXKELSELK 485
VD ++ ELK
Sbjct: 572 VVDEIAAQIEELK 584
>AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical
protein Y39G10AR.15 protein.
Length = 704
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 55 HIY*IKLRVIPNKMASSYFTESEAPRDF--RVSSTESDGQ 168
H+Y K R + N S FTE + RDF ++SS DG+
Sbjct: 545 HVYSRKRRPLTNPGKSERFTEKKYTRDFHLKMSSMAFDGE 584
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 273 YSEKLSKLLRLKMNRKHILDRCERL-LAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSN 449
+ E L + L + + H DR + L L K ++ L++ C++ + L+ ++ +
Sbjct: 297 HEEALKEELLARQDEFH--DRLQELQLQSKRSREDLVS----CKNDVTALEKKLHNKEKE 350
Query: 450 VDXKXKELSELKTYNTELALRASKISEK 533
V KEL ++KT + R ++++ +
Sbjct: 351 VQTLTKELDQVKTETNDKIRRLTEVTSE 378
>AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical
protein H06I04.1c protein.
Length = 231
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 303 LKMNRKHILDRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSEL 482
L+ +R+ ++DR E + K+K T+A QC + + R + EL E+
Sbjct: 133 LEKSRRMVIDRDEHIEELKMKLGKAETKASQCESDLTQTSSDLAMERLRCEVLTGELHEI 192
Query: 483 KTY--NTELALRA 515
NT+ ++A
Sbjct: 193 DGIFRNTQSTIQA 205
>AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical
protein H06I04.1b protein.
Length = 428
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 303 LKMNRKHILDRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSEL 482
L+ +R+ ++DR E + K+K T+A QC + + R + EL E+
Sbjct: 330 LEKSRRMVIDRDEHIEELKMKLGKAETKASQCESDLTQTSSDLAMERLRCEVLTGELHEI 389
Query: 483 KTY--NTELALRA 515
NT+ ++A
Sbjct: 390 DGIFRNTQSTIQA 402
>AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical
protein H06I04.1a protein.
Length = 456
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 303 LKMNRKHILDRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDXKXKELSEL 482
L+ +R+ ++DR E + K+K T+A QC + + R + EL E+
Sbjct: 330 LEKSRRMVIDRDEHIEELKMKLGKAETKASQCESDLTQTSSDLAMERLRCEVLTGELHEI 389
Query: 483 KTY--NTELALRA 515
NT+ ++A
Sbjct: 390 DGIFRNTQSTIQA 402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,909,060
Number of Sequences: 27780
Number of extensions: 269371
Number of successful extensions: 754
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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