Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0276.Seq
         (797 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40140| Best HMM Match : SASP_gamma (HMM E-Value=0.36)               31   1.4  
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)                     30   1.9  
SB_18219| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.5  
SB_14593| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.5  
SB_2856| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.3  
SB_40783| Best HMM Match : MH2 (HMM E-Value=0)                         29   3.3  
SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_51436| Best HMM Match : Neuromodulin (HMM E-Value=6.2)              29   4.4  
SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25)              29   5.8  
SB_27454| Best HMM Match : Lipase_GDSL (HMM E-Value=0.091)             29   5.8  
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)           29   5.8  
SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  

>SB_40140| Best HMM Match : SASP_gamma (HMM E-Value=0.36)
          Length = 704

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = +3

Query: 348 TGQAYRDFVAGPYFRNRIEDQITESYRPTRSP--ATTVPSAYDDPDPQLYFRQGKRTTSQ 521
           T    RDFV G YFR R   ++  +   T S     T+P    D D  L    G +    
Sbjct: 173 TSTPIRDFVPGSYFRGRPSGRLENNPAKTESKECRVTIPYPLIDDDLFLCDSHGTKGDET 232

Query: 522 APSLKP 539
            PS  P
Sbjct: 233 TPSHAP 238


>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
          Length = 3489

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +3

Query: 618  NTLNKERTLI-QLKKRVQRSKRRLQASKGSSPTFPKRGQQTFLKAG 752
            NTLN ERTL+  LK  + R K R+  S+  S    +R Q++  KAG
Sbjct: 2890 NTLNSERTLVSDLKNALAREKARI--SELGSALEKQRVQESTAKAG 2933


>SB_18219| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 362 QRLCCRTLLQ-KQNRRSNNGKLQTDP 436
           +R+CC TLLQ   NRR N G    DP
Sbjct: 36  ERICCTTLLQCYPNRRINGGDNNQDP 61


>SB_14593| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 65

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 362 QRLCCRTLLQ-KQNRRSNNGKLQTDP 436
           +R+CC TLLQ   NRR N G    DP
Sbjct: 21  ERICCTTLLQCYPNRRINGGDNNQDP 46


>SB_2856| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 66

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 627 NKERTLIQLKKRVQRSKRRLQASKGSSPTFPKRGQQTFLKAG 752
           NK RTL Q  ++    +R  Q S G SP  P  GQ++   +G
Sbjct: 19  NKWRTLGQHSRQPSEGQRSEQRSAGQSPEQPSAGQRSGQPSG 60


>SB_40783| Best HMM Match : MH2 (HMM E-Value=0)
          Length = 494

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
 Frame = +3

Query: 297 EINNYYDIETTVTVEFDTGQAYRDFVAGPYFRNRIEDQITESYRPTRSPATTVP--SAYD 470
           ++ ++++++     E+  G   ++    PY  +R+E  +       R P    P   A D
Sbjct: 97  DLQSHHELKPLECCEYAFGLKQKEVCINPYHYHRVESPVPRQSEYPRPPPPLPPPFRATD 156

Query: 471 DPDPQLY-----FRQGKRTTSQAPS 530
           DP P  Y     F   + T+ Q+PS
Sbjct: 157 DP-PMPYNASFPFTNRQNTSEQSPS 180


>SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2353

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +3

Query: 312 YDIETTVTVEFDTGQAYRDFVAGPYFRNRIEDQITESYRPTRSPATTVPSA 464
           Y   + ++ E DT     DFV       + + +ITES   T SP TT  SA
Sbjct: 842 YSDTSQISFEDDTPVTEEDFVI---LEKKCQSKITESASDTNSPVTTEDSA 889


>SB_51436| Best HMM Match : Neuromodulin (HMM E-Value=6.2)
          Length = 359

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +3

Query: 312 YDIETTVTVEFDTGQAYRDFVAGPYFRNRIEDQITESYRPTRSPATTVPSA 464
           Y   + ++ E DT     DFV       + + +ITES   T SP TT  SA
Sbjct: 128 YSDTSQISFEDDTPVTEEDFVI---LEKKCQSKITESASDTNSPVTTEDSA 175


>SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25)
          Length = 781

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -3

Query: 693 RPVTFFSNVAPASLVELGSVPC-LGCCLRFSC-YFGSSCHSGRLCLS 559
           +PV    + AP+SL+EL +  C  GC    SC   G SC     C++
Sbjct: 707 KPVLMSKDPAPSSLLELSTCGCKSGCQRNCSCSNNGLSCSKACSCMA 753


>SB_27454| Best HMM Match : Lipase_GDSL (HMM E-Value=0.091)
          Length = 522

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 345 DTGQAYRDFVAGPYFRNRIEDQITESYRPTRSPATTVPSAYDDP 476
           +T  A+   +   YF+  ++   TE   P +SPAT   S Y DP
Sbjct: 274 NTAHAHIAVMIAEYFKEALK---TEQAEPLQSPATLPQSLYSDP 314


>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
          Length = 2040

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 354  QAYRDFVAGPYFRNRIEDQITESYRPTRSPATTV 455
            Q YR  + G   R+RI+D +  S  P R+P + +
Sbjct: 1418 QEYRSRIEGQVLRSRIQDLVPRSRIPGRAPRSRI 1451


>SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2937

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 687  VTFFSNVAPASLVELGSV-PCLGCCLRFSCYFGSSCHSGRLCLSW 556
            V + +   PAS V   ++  C GC  R + Y GS+C +   C+ W
Sbjct: 1461 VAYAAGFRPASSVNAFALYNCAGC--RKTLYSGSTCQTELYCMRW 1503


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,295,071
Number of Sequences: 59808
Number of extensions: 445353
Number of successful extensions: 3284
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3284
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)