Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0276.Seq
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U47292-1|AAB05397.1| 129|Homo sapiens spasmolytic peptide protein. 32 2.1
BC032820-1|AAH32820.1| 129|Homo sapiens trefoil factor 2 (spasm... 32 2.1
AB038162-2|BAB13730.1| 129|Homo sapiens trefoil factor 2 protein. 32 2.1
X51698-1|CAA35995.1| 130|Homo sapiens spasmolytic polypeptide p... 32 2.8
BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 30 8.4
AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protei... 30 8.4
AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 30 8.4
AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 30 8.4
AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein. 30 8.4
AB051390-1|BAB18461.1| 807|Homo sapiens VSGP/F-spondin protein. 30 8.4
AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein. 30 8.4
>U47292-1|AAB05397.1| 129|Homo sapiens spasmolytic peptide protein.
Length = 129
Score = 32.3 bits (70), Expect = 2.1
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Frame = -3
Query: 447 SPENGSVCSFP------LFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRC------RNNC 304
SP N + C FP FD CF S V C + +P + +C R NC
Sbjct: 35 SPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF---HPLPKQESDQCVMEVSDRRNC 91
Query: 303 LSP*FAPDQCSSSKISVQG-VFDIP--HFPR 220
P +P++C+S K +F++P FP+
Sbjct: 92 GYPGISPEECASRKCCFSNFIFEVPWCFFPK 122
>BC032820-1|AAH32820.1| 129|Homo sapiens trefoil factor 2
(spasmolytic protein 1) protein.
Length = 129
Score = 32.3 bits (70), Expect = 2.1
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Frame = -3
Query: 447 SPENGSVCSFP------LFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRC------RNNC 304
SP N + C FP FD CF S V C + +P + +C R NC
Sbjct: 35 SPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF---HPLPKQESDQCVMEVSDRRNC 91
Query: 303 LSP*FAPDQCSSSKISVQG-VFDIP--HFPR 220
P +P++C+S K +F++P FP+
Sbjct: 92 GYPGISPEECASRKCCFSNFIFEVPWCFFPK 122
>AB038162-2|BAB13730.1| 129|Homo sapiens trefoil factor 2 protein.
Length = 129
Score = 32.3 bits (70), Expect = 2.1
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Frame = -3
Query: 447 SPENGSVCSFP------LFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRC------RNNC 304
SP N + C FP FD CF S V C + +P + +C R NC
Sbjct: 35 SPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF---HPLPKQESDQCVMEVSDRRNC 91
Query: 303 LSP*FAPDQCSSSKISVQG-VFDIP--HFPR 220
P +P++C+S K +F++P FP+
Sbjct: 92 GYPGISPEECASRKCCFSNFIFEVPWCFFPK 122
>X51698-1|CAA35995.1| 130|Homo sapiens spasmolytic polypeptide
protein.
Length = 130
Score = 31.9 bits (69), Expect = 2.8
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 13/85 (15%)
Frame = -3
Query: 447 SPENGSVCSFP------LFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRC------RNNC 304
SP N + C FP FD CF S V C + +P + +C R NC
Sbjct: 36 SPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF---HPLPKQESDQCVMEVSDRRNC 92
Query: 303 LSP*FAPDQCSSSKISVQG-VFDIP 232
P +P++C+S K +F++P
Sbjct: 93 GYPGISPEECASRKCCFSNFIFEVP 117
>BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 621 TLNKERTLIQLKKRVQRSKRRLQASKGSSPTFPKRGQQTFLKAGYPS 761
T +K + + K +RSK + QA K SPT +R Q+ KA P+
Sbjct: 213 TRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPT 259
>AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protein
kinase protein.
Length = 1007
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 621 TLNKERTLIQLKKRVQRSKRRLQASKGSSPTFPKRGQQTFLKAGYPS 761
T +K + + K +RSK + QA K SPT +R Q+ KA P+
Sbjct: 213 TRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPT 259
>AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 621 TLNKERTLIQLKKRVQRSKRRLQASKGSSPTFPKRGQQTFLKAGYPS 761
T +K + + K +RSK + QA K SPT +R Q+ KA P+
Sbjct: 213 TRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPT 259
>AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 621 TLNKERTLIQLKKRVQRSKRRLQASKGSSPTFPKRGQQTFLKAGYPS 761
T +K + + K +RSK + QA K SPT +R Q+ KA P+
Sbjct: 213 TRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPT 259
>AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein.
Length = 1007
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 621 TLNKERTLIQLKKRVQRSKRRLQASKGSSPTFPKRGQQTFLKAGYPS 761
T +K + + K +RSK + QA K SPT +R Q+ KA P+
Sbjct: 213 TRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPT 259
>AB051390-1|BAB18461.1| 807|Homo sapiens VSGP/F-spondin protein.
Length = 807
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -3
Query: 444 PENGSVCSFPLFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRCRNNC 304
PE+GSVC+ P ++ C ++ S C++ + +W C C
Sbjct: 532 PEDGSVCTLPTEEMEKCTVNEECSPSSCLMTEWG----EWDECSATC 574
>AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein.
Length = 1028
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 621 TLNKERTLIQLKKRVQRSKRRLQASKGSSPTFPKRGQQTFLKAGYPS 761
T +K + + K +RSK + QA K SPT +R Q+ KA P+
Sbjct: 234 TRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPT 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,236,890
Number of Sequences: 237096
Number of extensions: 2011828
Number of successful extensions: 4754
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4754
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -