Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0276.Seq
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457741-17|CAM36359.1|  300|Caenorhabditis elegans Hypothetical...    30   2.2  
Z74030-16|CAI79165.1|  481|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z74030-15|CAI79164.1|  477|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z74030-8|CAD54129.1|  181|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z74030-6|CAA98444.2|  508|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z81518-2|CAE11300.1|  340|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z47812-9|CAA87794.2|  377|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>CU457741-17|CAM36359.1|  300|Caenorhabditis elegans Hypothetical
           protein C42C1.16 protein.
          Length = 300

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = -1

Query: 398 SVSEVRSGNKVSVCLSRIKFHCNSGLDVVIIVYLLNLLRINVPLRKYLFRASLT 237
           SV  + +G+ ++  ++   FH  + L V  IV++L++  + +PLR   F    T
Sbjct: 246 SVGSIFAGSPLAHLIATFSFHVFTILFVTQIVFVLSISSLQIPLRMEAFSEKKT 299


>Z74030-16|CAI79165.1|  481|Caenorhabditis elegans Hypothetical
           protein D1054.9e protein.
          Length = 481

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +3

Query: 666 QRSKRRLQASKGSSPTFPKRGQQTFLKAGYPSFESXVTKPFQN 794
           +R +   +  +G  PT+ + G QT   A YPS+++   +P++N
Sbjct: 21  ERIEPTYEQRRGEQPTYERPGIQTNQYANYPSYQN--RQPYEN 61


>Z74030-15|CAI79164.1|  477|Caenorhabditis elegans Hypothetical
           protein D1054.9d protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +3

Query: 666 QRSKRRLQASKGSSPTFPKRGQQTFLKAGYPSFESXVTKPFQN 794
           +R +   +  +G  PT+ + G QT   A YPS+++   +P++N
Sbjct: 21  ERIEPTYEQRRGEQPTYERPGIQTNQYANYPSYQN--RQPYEN 61


>Z74030-8|CAD54129.1|  181|Caenorhabditis elegans Hypothetical
           protein D1054.9c protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +3

Query: 666 QRSKRRLQASKGSSPTFPKRGQQTFLKAGYPSFESXVTKPFQN 794
           +R +   +  +G  PT+ + G QT   A YPS+++   +P++N
Sbjct: 21  ERIEPTYEQRRGEQPTYERPGIQTNQYANYPSYQN--RQPYEN 61


>Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical
           protein D1054.9b protein.
          Length = 559

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +3

Query: 666 QRSKRRLQASKGSSPTFPKRGQQTFLKAGYPSFESXVTKPFQN 794
           +R +   +  +G  PT+ + G QT   A YPS+++   +P++N
Sbjct: 21  ERIEPTYEQRRGEQPTYERPGIQTNQYANYPSYQN--RQPYEN 61


>Z74030-6|CAA98444.2|  508|Caenorhabditis elegans Hypothetical
           protein D1054.9a protein.
          Length = 508

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +3

Query: 666 QRSKRRLQASKGSSPTFPKRGQQTFLKAGYPSFESXVTKPFQN 794
           +R +   +  +G  PT+ + G QT   A YPS+++   +P++N
Sbjct: 21  ERIEPTYEQRRGEQPTYERPGIQTNQYANYPSYQN--RQPYEN 61


>AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical
           protein Y53C10A.4 protein.
          Length = 908

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 381 PYFRNRIEDQITESYRPTRSPATTVPSAYDDPDPQLYFRQGKRTT 515
           P F++     +TE Y+ + S +++  S   DP P+ YF + + T+
Sbjct: 689 PAFKSSSVAMLTEPYKSSSSSSSSTSSIPSDPAPRPYFLKEEYTS 733


>Z81518-2|CAE11300.1|  340|Caenorhabditis elegans Hypothetical
           protein F28D9.2a protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/68 (23%), Positives = 32/68 (47%)
 Frame = -3

Query: 702 CP*RPVTFFSNVAPASLVELGSVPCLGCCLRFSCYFGSSCHSGRLCLSWMQWLRWVLKTE 523
           CP  P  ++       L+ L S+P    C  F  ++       R CL++ Q++ ++++ +
Sbjct: 8   CPYGPPDYYMKTL--QLIGLFSLPINFLCFYFVWFYTPKESKFRYCLAYFQFIAFLVEVD 65

Query: 522 LD**FVCP 499
           +    VCP
Sbjct: 66  MS--LVCP 71


>Z47812-9|CAA87794.2|  377|Caenorhabditis elegans Hypothetical
           protein T05H10.8 protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 348 TGQAYRD-FVAGPYFRNRIEDQITESYRPTRSPATTVP 458
           +G+A R+ F A   F   I+D++ ++  P +S  TT+P
Sbjct: 112 SGKALRESFEAWDIFLREIDDELEKTLGPVKSAVTTLP 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,412,983
Number of Sequences: 27780
Number of extensions: 324503
Number of successful extensions: 919
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)