Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0275.Seq
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 37 0.018
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 31 1.5
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 31 1.5
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 30 2.7
08_01_0013 + 99251-100663 30 2.7
04_01_0150 + 1741639-1741742,1742432-1742543,1742856-1743594,174... 30 2.7
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710... 30 2.7
01_06_0182 - 27264990-27265049,27265531-27265648,27265733-272658... 30 2.7
08_02_1000 + 23433447-23433946,23434078-23434279 29 3.6
02_01_0529 - 3846489-3847268 29 3.6
11_01_0189 - 1493618-1493637,1493728-1493795,1494070-1494207,149... 29 4.7
07_01_0498 + 3734498-3734976,3736176-3736800 29 4.7
06_03_0905 + 25843547-25844314 29 4.7
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 29 4.7
04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158 29 4.7
04_04_0126 + 22952577-22952871,22952912-22953519,22954125-229545... 29 4.7
04_04_0020 + 22182649-22182829,22183900-22183999,22184415-221844... 29 4.7
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 4.7
09_02_0601 + 11112201-11112386,11112471-11114080,11114345-111145... 29 6.2
03_01_0344 + 2704860-2705156,2705249-2705494 29 6.2
02_01_0362 + 2607097-2607371,2607766-2608612,2608842-2608910,260... 29 6.2
10_08_0573 + 18872720-18872781,18873261-18873610,18873917-188743... 28 8.3
02_05_0382 + 28491318-28491374,28492031-28492114,28492249-284922... 28 8.3
02_03_0231 - 16636377-16636403,16636590-16636645,16636793-166368... 28 8.3
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 28 8.3
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 37.1 bits (82), Expect = 0.018
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +3
Query: 558 SASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQSLKG---LKPIRLTN--GAPKGQE 722
S GNP+GG GPRG G G G P G G +G KP R G +G +
Sbjct: 11 SGGGNPRGGGGGGPRGCGGGGPRSGGGGGPRGGGGGGPRGSGSSKPRRGDGGLGCGRGDD 70
Query: 723 ALTGLRKGGG 752
+ GL GGG
Sbjct: 71 SDLGLGYGGG 80
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 558 SASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQSLKG 677
+ GNP+GG GPRG G G G P G G +G
Sbjct: 3 NGGGNPRGGGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRG 42
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +3
Query: 258 PVPQPNVAGMAPSNLVP-CVSNYDDLSCPTSPGQEGDYANYYLT----NSANNTIITDGT 422
P+P + A PS P C S + +S +S E D+ NY T +++ T++ DG
Sbjct: 92 PMPLASPAAAPPSPSPPACASAAESVSGGSSSDDEADHRNYRYTDPVVHTSGRTVLPDGH 151
Query: 423 N 425
N
Sbjct: 152 N 152
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = -2
Query: 751 PPPLRKPVKASCPLG--APFVNRIGFNPLRDWPTNPR-GTSPEFGVSPVPTSPLGPERQP 581
PPP+ P + P+ AP +G P P + P++G P P P+ + QP
Sbjct: 58 PPPMSTPPVVAPPMHSFAPSFRPLGAPPPPPPPQQVQVQVPPQYGGVPNPGYPMAQQMQP 117
Query: 580 PLGFPLAESP 551
P G P P
Sbjct: 118 P-GVPHVMPP 126
>08_01_0013 + 99251-100663
Length = 470
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Frame = -1
Query: 629 WGLPSSNVAPWSGKATPF-----RVPASRK-PLVHWPGSP 528
WG P N+ PW+ R+P SR+ P +W G+P
Sbjct: 193 WGWPEVNIRPWAPLLAEMAEEKARLPWSRREPYAYWKGNP 232
>04_01_0150 +
1741639-1741742,1742432-1742543,1742856-1743594,
1743724-1743776,1743914-1743991,1744107-1744405,
1744660-1745476,1745576-1745842,1745987-1746181,
1746287-1746372,1746469-1746657,1747138-1747207,
1747399-1747552,1747706-1747832,1749158-1749254
Length = 1128
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
Frame = +3
Query: 279 AGMAPSNLVPCVSNYDDLSCPTSPGQEGDYANYYLTNSANNTIITDGTNVI--DIRVGSG 452
AG PS P + + P +PGQ D NS V D +
Sbjct: 98 AGTTPSTQRPSSQQQNVCTTPQNPGQVPDQHRASAPNSQIEASQEQTVMVAAPDCYLNFN 157
Query: 453 PCSSYIDVCCLAPDQRPQ-QSHHAQARRTWPMN 548
+ C+ P Q+PQ Q H QA++ P N
Sbjct: 158 TTAISPVAMCVHPSQQPQSQQHQQQAKQLHPTN 190
>02_03_0223 +
16570264-16570357,16570470-16570552,16570974-16571032,
16571607-16571665,16572276-16572325,16573575-16573612,
16574619-16574695,16575593-16576503
Length = 456
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 751 PPPLRKPVKASCPLGAP-FVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQ 584
PPP R+P + C P R + LR P P TSP G S P P ER+
Sbjct: 224 PPPPRRPSRRGCLSWRPTMTRRASGSSLRRAPPPP--TSPRHGASD-PAQPRHQERR 277
>01_06_0182 -
27264990-27265049,27265531-27265648,27265733-27265811,
27266816-27267116
Length = 185
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -2
Query: 709 GAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQPPLGFPLAESP 551
G P GF P P P+ ++G P+S G QP +GFP P
Sbjct: 10 GKPRSASSGFQPSA--PPQPQAQQYQYGTFGAPSSAPGEVPQPAVGFPQPAPP 60
>08_02_1000 + 23433447-23433946,23434078-23434279
Length = 233
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/64 (28%), Positives = 22/64 (34%)
Frame = +3
Query: 603 GDVGTGETPNSGEVPLGLVGQSLKGLKPIRLTNGAPKGQEALTGLRKGGGFPWIPSRKRW 782
G G P G G G + LK + A G E G PW+ R W
Sbjct: 50 GSGAGGRAPTPGSEAAGARGAGRRWLKAAGMAMAA--GTELAEGAEAAAAVPWLRRRGAW 107
Query: 783 VLQR 794
L+R
Sbjct: 108 RLRR 111
>02_01_0529 - 3846489-3847268
Length = 259
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 766 GIQGNPPPLRK-PVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPE 632
G Q PPP P +A P GAP V G P +PTNP S +
Sbjct: 17 GSQAYPPPAAAYPPQAMVP-GAPAVVPPGSQPSAPFPTNPAQLSAQ 61
>11_01_0189 -
1493618-1493637,1493728-1493795,1494070-1494207,
1494647-1494698,1494803-1494902,1495606-1495681,
1495757-1495844,1496248-1496342,1496506-1496605,
1496765-1496879,1497077-1497241,1497362-1497547
Length = 400
Score = 29.1 bits (62), Expect = 4.7
Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 7/82 (8%)
Frame = +3
Query: 537 WPMNQGLSASGNPKGG-CL-----SGPRGDVGTGETPNS-GEVPLGLVGQSLKGLKPIRL 695
W N G + KGG CL G V +G T +S G P GL +GL I L
Sbjct: 176 WRPNSGKMIAVGCKGGICLWSASYPGNVASVKSGVTSSSFGAFPRGLGMPIRRGLSSISL 235
Query: 696 TNGAPKGQEALTGLRKGGGFPW 761
+P G LT G W
Sbjct: 236 VQWSPSGDYLLTAKLDGTFHLW 257
>07_01_0498 + 3734498-3734976,3736176-3736800
Length = 367
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 428 DVCPVSDNGVIGRIRQVIVSVIPFLAWGGRARKV 327
D P +D+GV+ I +V + FLA GG R V
Sbjct: 26 DEAPAADDGVVEEIAIPVVDLAAFLASGGIGRDV 59
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = -2
Query: 751 PPPLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
PPPL P K P+ P + P +PT P T+P V P T P P PP+
Sbjct: 76 PPPLVAPPKV--PVTHPPKGPVTRPPPVTYPTPPV-TTPPVVVGPPVTYPTPPVTTPPV 131
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 29.1 bits (62), Expect = 4.7
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -2
Query: 757 GNPPPLRKPVKASCPLGA-PFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQP 581
G PPL + A P G P V + + + DW P SP FGVS +P+S L P
Sbjct: 511 GITPPLPDEI-ALPPRGRLPHVI-VHLDEMEDWTPGPP-RSPSFGVSGLPSSDLSDSGGP 567
Query: 580 PLGFPLAES-PWFIG 539
P + W++G
Sbjct: 568 ---IPTVRTFQWYLG 579
>04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158
Length = 974
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 482 SGSRPETATIPSRPGPENLANEPRAFG*REP*RGLPFRTKGRRWNWGDP--KFRRSSPGI 655
S RPE A S+P E R G EP RG RW++ P + RR+ P I
Sbjct: 343 SSRRPEGAVPTSQPEGERKKKRLRKMGGTEPCRGNLISPS--RWSFSRPPRRSRRALPAI 400
Query: 656 GRP 664
P
Sbjct: 401 PSP 403
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 629 WGLPSSNVAPWSGKAT--PFRVPASRKPLVHWPGSPGLGVMGLLRSLVGSQTADVD 468
WG P+S AP SG + P R + + L P + L LL++L + T +D
Sbjct: 504 WGEPASGNAPESGTSIGGPSRAAPTPRRLSSLPSAAPLSAEPLLQALAAANTTVLD 559
>04_04_0126 +
22952577-22952871,22952912-22953519,22954125-22954596,
22954882-22954955,22955559-22955937,22956659-22956711
Length = 626
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/72 (31%), Positives = 28/72 (38%)
Frame = +3
Query: 171 GVRAEHGHRGSGVDH*SDSHLLESPDAIQPVPQPNVAGMAPSNLVPCVSNYDDLSCPTSP 350
G H RG G DS PD QP+ Q + A A P V + C SP
Sbjct: 5 GAAPPHPPRGGGGGSPEDSSTARRPDFEQPLLQAHAAVPARGKQEP-VERDHEAQC--SP 61
Query: 351 GQEGDYANYYLT 386
+GD A + T
Sbjct: 62 EADGDGATFVRT 73
>04_04_0020 +
22182649-22182829,22183900-22183999,22184415-22184491,
22184718-22184809,22188655-22189767
Length = 520
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = -2
Query: 739 RKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQ---PPLGF 569
R PV A+ +G P +R P R SPE S + PERQ PPL
Sbjct: 278 RNPVPAALRVGFPQRSRTPLMPAPVSAVKRRAPSPEPSASSESSDGFPPERQPAFPPLPL 337
Query: 568 P 566
P
Sbjct: 338 P 338
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = -2
Query: 751 PPPLRKPVKASCPLGAPFVNR----IGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQ 584
PPP R P+ P P R + PL P ++P +P P P
Sbjct: 133 PPPARTPMPTPTPTPTPTPTRPPVPVWAAPLPARTPTPTPSAPPRAAAPSPAGTPSPSPI 192
Query: 583 PPLGFPLA 560
PP P++
Sbjct: 193 PPSSTPVS 200
>09_02_0601 +
11112201-11112386,11112471-11114080,11114345-11114579,
11115233-11115358
Length = 718
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 754 NPPPLRKPVKASCPLGAPFVN--RIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPE 590
+PPPLR P + P +P + P++ PT+P S V TSP P+
Sbjct: 427 SPPPLRSPPRQPTPPPSPSQQPPLLAPQPVQASPTSPAKQHAPPAPSSVQTSPPTPQ 483
>03_01_0344 + 2704860-2705156,2705249-2705494
Length = 180
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = +3
Query: 501 PQQSHHAQARRTWPMNQGLSASGNPKGGCLSGPRGDVGT 617
P H Q ++ W + + + GC S PR D T
Sbjct: 124 PLLQHQQQQQQAWQIEHESTMTSTQSSGCYSAPRSDGST 162
>02_01_0362 +
2607097-2607371,2607766-2608612,2608842-2608910,
2609968-2610202,2610454-2610536,2610924-2611046,
2611326-2611379
Length = 561
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -2
Query: 661 PTNPRGTSPEFGVSPVPTSPLGPERQPPLGFPLAESPWFIGQVLRA 524
P P TSP +P P +P PE P + L +G +L A
Sbjct: 56 PPAPPETSPPNTSTPAPPAPDVPENSSPPDYDLCSDRCSLGDMLEA 101
>10_08_0573 + 18872720-18872781,18873261-18873610,18873917-18874334,
18875172-18877180,18877390-18877398,18880291-18880398,
18880399-18880469,18880769-18881785
Length = 1347
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 599 WSGKATPFRVPASRKPLVHWPGSP 528
WSG ++P + S+ P VH P P
Sbjct: 1169 WSGLSSPISIILSKLPTVHLPSGP 1192
>02_05_0382 +
28491318-28491374,28492031-28492114,28492249-28492272,
28492398-28492472,28493083-28493157,28493198-28493290,
28493332-28493409,28493690-28493767,28494084-28494147,
28494474-28494655,28494729-28495064,28495148-28495267,
28495434-28495923,28496240-28496502
Length = 672
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 234 LESPDAIQPVPQPNVAGMAPSNLVPCVSNYDDLSCPTSPGQEGDYAN 374
LE P P+ N A + +VPC+S++ D PG D N
Sbjct: 509 LEEPAKGCPIDGINKADLK-DEIVPCISSHHDCVANRCPGSAADITN 554
>02_03_0231 -
16636377-16636403,16636590-16636645,16636793-16636853,
16637590-16637649,16638007-16638096,16638775-16638906,
16639016-16639293,16639916-16639949,16640036-16640105,
16641170-16641282,16641654-16641836,16642106-16642283,
16642958-16643142,16643347-16643477,16643620-16643772,
16643849-16643995,16644662-16644737
Length = 657
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 661 PTNPRGTSPEFGVSPVPTSPLGPERQPP 578
P P P + + +PT+PLGP PP
Sbjct: 536 PQPPASDGPYYYANNMPTAPLGPPMFPP 563
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -1
Query: 677 PFEGLADQSQGNFSGIWGLPSSNVAPWSGKATPFRVPASRKPLVHWPGSPGL 522
P E ++S+ + P+ N AP + A PA+ +PL +P P L
Sbjct: 416 PAEATKNESESESAATESAPAVNSAPVAEAAPEAAPPAAPRPLSPYPNYPDL 467
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,136,021
Number of Sequences: 37544
Number of extensions: 731061
Number of successful extensions: 2486
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2474
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -