Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0275.Seq
         (854 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    36   0.002
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.96 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    27   0.96 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   1.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.7  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       25   3.9  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   3.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.8  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   9.0  
AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450 pr...    23   9.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.0  

>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 336 CPTSPGQEGDYANYYLTNSANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQ 497
           C TS G++G     Y     +  +   G N+IDIR     C+ ++  CC  P Q
Sbjct: 8   CTTSKGEDGICVYQY--QCTDGVVSHSGANIIDIRHPLDDCNDHLMQCCAEPKQ 59


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.6 bits (56), Expect = 0.96
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +3

Query: 153 HRLSRVGVRAEHGHRGSGVDH*SDSHLLESPDAIQPVPQPNVAGMAPSNLVPCVSNYDDL 332
           +R+SR+  +A   H      H + + LL+ PDA+  VP      +  ++    +SN D+ 
Sbjct: 415 NRISRIDRQALRNHSALQELHLNGNKLLQVPDALYDVPLLRTLDLGENH----ISNIDNA 470

Query: 333 S 335
           S
Sbjct: 471 S 471


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 26.6 bits (56), Expect = 0.96
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 185 TWTPGVWSRSLI*FSPPRITRRH 253
           T T G W+R LI    P ITRRH
Sbjct: 865 TTTSGSWTRRLIPNIQPWITRRH 887


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = -2

Query: 787 STQRFRDGIQGNPPPLRKPVKASCPLGAPFVNRI-GFNPLRDWPTNPRGTSPEFGVSPVP 611
           S   F DGI   PPP   P  +  P G P    +   +P         G + E  V P+P
Sbjct: 772 SRSAFADGIGSPPPPPPPPPSSLSPGGVPRPTVLQKLDPQLSEEAAAVGANVEQRVPPLP 831

Query: 610 TS 605
            S
Sbjct: 832 NS 833


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 10/96 (10%)
 Frame = +3

Query: 519 AQARRTWPMNQGL----SASGNPKGGCLSGPRGDVGTGETPNSGEVP--LGLVG----QS 668
           A+  R +P ++GL       G P    L GP+GD G    P    +P   G+ G      
Sbjct: 116 AKGVRGFPGSEGLPGEKGTKGEPGPVGLQGPKGDRGRDGLPGYPGIPGTNGVPGVPGAPG 175

Query: 669 LKGLKPIRLTNGAPKGQEALTGLRKGGGFPWIPSRK 776
           L G      T+G P G   L G     G+  IP  K
Sbjct: 176 LAGRDGCNGTDGLP-GLSGLPGNPGPRGYAGIPGTK 210



 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 512 PSRPGPENLANEP 550
           P +PGPE L  EP
Sbjct: 485 PGQPGPEGLRGEP 497


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 588 LSGPRGDVGTGETPNSGEVPLGLVGQSLKGLKPIRLTNGAPKG 716
           + GPR  +    +  SG +P G+VG       P+ +  GAP G
Sbjct: 272 MGGPRPQISPQNSNLSGGMPSGMVGPP---RPPMPMQGGAPGG 311



 Score = 25.0 bits (52), Expect = 2.9
 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
 Frame = -2

Query: 841 PSFPLGGRANVK--LKPAR*STQRF-RDGIQGNPPPLRKPVKASCPLGAPFVNRIGFNPL 671
           P  P G    ++  ++P   S Q   R  + G PPP+R P     P+G P   R   +P 
Sbjct: 230 PQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPP----NPMGGP---RPQISPQ 282

Query: 670 RDWPTNPRGTSPEFGVSPVPTSPLGPERQPPLGFPLAESPWF 545
               +N  G  P   V P P  P+  +   P G P    P F
Sbjct: 283 N---SNLSGGMPSGMVGP-PRPPMPMQGGAPGGPPQGMRPNF 320



 Score = 24.6 bits (51), Expect = 3.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 249 AIQPVPQPNVAGMAPSNLV 305
           A  P PQP++A + PS++V
Sbjct: 81  AASPAPQPSLAPVVPSSVV 99


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 135 LLDYYSHDGSHFQYLNRNAL 76
           L+ +Y   GS F YLNR A+
Sbjct: 224 LITHYYPQGSLFDYLNRTAI 243


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 489 PDQRPQQSHHAQARRTWPMNQGLSASGNPKGG 584
           P Q+PQ S  + A+ T   + GL  S +  GG
Sbjct: 291 PSQQPQPSSQSNAQLTNGGSNGLLGSSSQAGG 322


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = -2

Query: 754 NPPPLRKPVKASCPLGAPF--VNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQP 581
           N PP   P   +  L APF  +N         +P  P    P    +P P  P+GP   P
Sbjct: 542 NIPPQFLPPPLNL-LRAPFFPLNPAQLRFPAGFPNLPNAQPPP---APPPPPPMGPPPSP 597

Query: 580 PLGFPL 563
             G PL
Sbjct: 598 LAGGPL 603


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 489 PDQRPQQSHHAQARRTWPMNQGLSASGNPKGGCLSGPRGDV 611
           P Q+ QQ    Q  +  P      A   P+   L+  RGDV
Sbjct: 216 PQQQQQQQQRNQHEQEQPRASTSRAVMPPRSEALTAVRGDV 256


>AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 484 WLPTRDRNNPITPRPGEPG 540
           WL  RD N+ +  +  EPG
Sbjct: 38  WLEQRDENDNVVNKRAEPG 56


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 547 FIGQVLRAWA*WDCCGLW 494
           F+ +++  +  WDCC +W
Sbjct: 777 FLMKMIDIFCVWDCCWVW 794


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,000,393
Number of Sequences: 2352
Number of extensions: 24776
Number of successful extensions: 64
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)