Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0275.Seq
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.20
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 32 0.60
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 32 0.60
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 32 0.60
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 32 0.60
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 32 0.60
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 31 1.4
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 31 1.4
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 31 1.4
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 31 1.4
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 31 1.4
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 30 1.8
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 30 1.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.4
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical ... 29 4.2
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z47808-4|CAA87772.1| 235|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 5.6
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 7.4
AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical ... 28 7.4
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 28 7.4
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z49071-8|CAA88878.2| 322|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 9.7
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 28 9.7
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -2
Query: 751 PPPLRKPVKASCPLGAPFVNRIGFNPLRDWPTN-PRGTSPEFGVS--PVPTSPLGPERQP 581
PP ++ PV P+G PF +++ P + P P G P F ++ P P P P P
Sbjct: 661 PPNIQPPVPHPPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPP 720
Query: 580 PLG 572
P G
Sbjct: 721 PPG 723
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 763 IQGNPP-PLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTS 605
IQ PP P +K P AP N G N R T+P P G+SP+ +S
Sbjct: 480 IQETPPTPAQKKTYGYAPTAAPTNNSRGTNTWRS--TSPSAVEPSGGMSPISSS 531
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 540 PMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQSLKGLKPIRLTNGAPKGQ 719
P N+G + G P G +GD G P + + G+ G+ P N AP GQ
Sbjct: 676 PGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQ-GMPGEPA----PENQVNPAPPGQ 730
Query: 720 EALTGL--RKG-GGFPWIP 767
L GL KG GG+P P
Sbjct: 731 PGLPGLPGTKGEGGYPGRP 749
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 540 PMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQSLKGLKPIRLTNGAPKGQ 719
P N+G + G P G +GD G P + + G+ G+ P N AP GQ
Sbjct: 675 PGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQ-GMPGEPA----PENQVNPAPPGQ 729
Query: 720 EALTGL--RKG-GGFPWIP 767
L GL KG GG+P P
Sbjct: 730 PGLPGLPGTKGEGGYPGRP 748
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 540 PMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQSLKGLKPIRLTNGAPKGQ 719
P N+G + G P G +GD G P + + G+ G+ P N AP GQ
Sbjct: 675 PGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQ-GMPGEPA----PENQVNPAPPGQ 729
Query: 720 EALTGL--RKG-GGFPWIP 767
L GL KG GG+P P
Sbjct: 730 PGLPGLPGTKGEGGYPGRP 748
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 540 PMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQSLKGLKPIRLTNGAPKGQ 719
P N+G + G P G +GD G P + + G+ G+ P N AP GQ
Sbjct: 676 PGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQ-GMPGEPA----PENQVNPAPPGQ 730
Query: 720 EALTGL--RKG-GGFPWIP 767
L GL KG GG+P P
Sbjct: 731 PGLPGLPGTKGEGGYPGRP 749
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 540 PMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQSLKGLKPIRLTNGAPKGQ 719
P N+G + G P G +GD G P + + G+ G+ P N AP GQ
Sbjct: 712 PGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQ-GMPGEPA----PENQVNPAPPGQ 766
Query: 720 EALTGL--RKG-GGFPWIP 767
L GL KG GG+P P
Sbjct: 767 PGLPGLPGTKGEGGYPGRP 785
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = -2
Query: 715 PLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQ-----PPLGFPLAESP 551
P PF F + P+ P S +G+ P+P+ + P PP G+P A +P
Sbjct: 112 PTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAP 171
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = -2
Query: 715 PLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQ-----PPLGFPLAESP 551
P PF F + P+ P S +G+ P+P+ + P PP G+P A +P
Sbjct: 112 PTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAP 171
>Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical
protein F56D5.1 protein.
Length = 359
Score = 31.5 bits (68), Expect = 0.79
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Frame = +3
Query: 477 CCLAPDQRPQQSHHAQARRTWPMNQGLSAS-------GNPKGGCLSGPRGDVGTGETPNS 635
C + P PQ AQ R P N G G P G SG +G GT TP
Sbjct: 137 CSICP-AGPQGPRGAQGERGLPGNAGRKGKSGKSGHPGQPGGIGASGAKGPTGTRGTPGM 195
Query: 636 GEVP--LGLVGQSLKGLKPIRLTNGAPKGQEALTG 734
P + G+ +KG ++ + G PKG +G
Sbjct: 196 KGPPGDTIIAGEGIKGPPGLQGSQG-PKGPPGNSG 229
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/82 (29%), Positives = 33/82 (40%)
Frame = +3
Query: 489 PDQRPQQSHHAQARRTWPMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQS 668
P +R + H R L+ + + GGC+ P G G P+ P G G
Sbjct: 104 PGKRGDEGHPGDEGRRGASGISLATTHDIPGGCIKCPEGPAGP-PGPDGDSGPEGFPG-- 160
Query: 669 LKGLKPIRLTNGAPKGQEALTG 734
L+G +GAP GQE G
Sbjct: 161 LQGQSGPSGEDGAP-GQEGAPG 181
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 537 WPMNQGLSA-SGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQ-SLKGLKPIRLTNG-- 704
WP ++G G P G +GDVG G P VP G++G+ L G + G
Sbjct: 173 WPGSKGEDGLPGRPGSPGFPGKKGDVGNGGVPG---VP-GMIGERGLPGAPGAQGMMGPI 228
Query: 705 APKGQEALTGLRKGGGFPWIPSRK 776
P GQ L G + G +P K
Sbjct: 229 GPPGQLGLPGPKGDLGSAGLPGSK 252
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +3
Query: 489 PDQRPQQSHHAQARRTWP-----MNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVP 647
P QR QQ QAR+ + + +A+G P + G + G P +G++P
Sbjct: 101 PQQRQQQQSQPQARQMSTQQAANLRKNAAAAGTPPKQAMQGASREQGNAHQPTAGQIP 158
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +3
Query: 489 PDQRPQQSHHAQARRTWP-----MNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVP 647
P QR QQ QAR+ + + +A+G P + G + G P +G++P
Sbjct: 101 PQQRQQQQSQPQARQMSTQQAANLRKNAAAAGTPPKQAMQGASREQGNAHQPTAGQIP 158
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 537 WPMNQGLSA-SGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQ-SLKGLKPIRLTNG-- 704
WP ++G G P G +GDVG G P VP G++G+ L G + G
Sbjct: 173 WPGSKGEDGLPGRPGSPGFPGKKGDVGNGGVPG---VP-GMIGERGLPGAPGAQGMMGPI 228
Query: 705 APKGQEALTGLRKGGGFPWIPSRK 776
P GQ L G + G +P K
Sbjct: 229 GPPGQLGLPGPKGDLGSAGLPGSK 252
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 537 WPMNQGLSA-SGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQ-SLKGLKPIRLTNG-- 704
WP ++G G P G +GDVG G P VP G++G+ L G + G
Sbjct: 173 WPGSKGEDGLPGRPGSPGFPGKKGDVGNGGVPG---VP-GMIGERGLPGAPGAQGMMGPI 228
Query: 705 APKGQEALTGLRKGGGFPWIPSRK 776
P GQ L G + G +P K
Sbjct: 229 GPPGQLGLPGPKGDLGSAGLPGSK 252
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 30.3 bits (65), Expect = 1.8
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 534 TWPMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQS-LKGLKPIRLTNGAP 710
++P N GLS G P G G G P +P GL G+S L GL P R N
Sbjct: 817 SYPGNPGLS--GQPGDAGYDGLDGVPGPPGYPGITGMP-GLKGESGLPGL-PGRQGNDGI 872
Query: 711 KGQEALTGLRKGGGFPWIPSR 773
GQ L G GFP P +
Sbjct: 873 PGQPGLEGECGEDGFPGSPGQ 893
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 30.3 bits (65), Expect = 1.8
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 534 TWPMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQS-LKGLKPIRLTNGAP 710
++P N GLS G P G G G P +P GL G+S L GL P R N
Sbjct: 1074 SYPGNPGLS--GQPGDAGYDGLDGVPGPPGYPGITGMP-GLKGESGLPGL-PGRQGNDGI 1129
Query: 711 KGQEALTGLRKGGGFPWIPSR 773
GQ L G GFP P +
Sbjct: 1130 PGQPGLEGECGEDGFPGSPGQ 1150
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 30.3 bits (65), Expect = 1.8
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 534 TWPMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQS-LKGLKPIRLTNGAP 710
++P N GLS G P G G G P +P GL G+S L GL P R N
Sbjct: 1073 SYPGNPGLS--GQPGDAGYDGLDGVPGPPGYPGITGMP-GLKGESGLPGL-PGRQGNDGI 1128
Query: 711 KGQEALTGLRKGGGFPWIPSR 773
GQ L G GFP P +
Sbjct: 1129 PGQPGLEGECGEDGFPGSPGQ 1149
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = -2
Query: 763 IQGNPPPLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQ 584
I G PPP P CP P GF P P +P ++PV L P++
Sbjct: 754 ISGGPPP-PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP---MAPVIPDYLPPKKV 809
Query: 583 PPLGFPLAESPW 548
P + P+ + PW
Sbjct: 810 PKVDGPMRKFPW 821
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = -2
Query: 763 IQGNPPPLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQ 584
I G PPP P CP P GF P P +P ++PV L P++
Sbjct: 754 ISGGPPP-PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP---MAPVIPDYLPPKKV 809
Query: 583 PPLGFPLAESPW 548
P + P+ + PW
Sbjct: 810 PKVDGPMRKFPW 821
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = -2
Query: 763 IQGNPPPLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQ 584
I G PPP P CP P GF P P +P ++PV L P++
Sbjct: 337 ISGGPPP-PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP---MAPVIPDYLPPKKV 392
Query: 583 PPLGFPLAESPW 548
P + P+ + PW
Sbjct: 393 PKVDGPMRKFPW 404
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Frame = -2
Query: 757 GNPPPLR--KPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPL----G 596
G+PPP R P P G+P G P P G+ P G P P
Sbjct: 287 GSPPPPRAGSPPPPPPPRGSP---PTGSLP----PPQAGGSPPPAGTGSPPPPPRQKRQA 339
Query: 595 PERQPPLGFPLAESP 551
PER PP G P SP
Sbjct: 340 PERSPPTGSPPTGSP 354
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Frame = -2
Query: 757 GNPPPLR--KPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPL----G 596
G+PPP R P P G+P G P P G+ P G P P
Sbjct: 308 GSPPPPRAGSPPPPPPPRGSP---PTGSLP----PPQAGGSPPPAGTGSPPPPPRQKRQA 360
Query: 595 PERQPPLGFPLAESP 551
PER PP G P SP
Sbjct: 361 PERSPPTGSPPTGSP 375
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Frame = -2
Query: 757 GNPPPLR--KPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPL----G 596
G+PPP R P P G+P G P P G+ P G P P
Sbjct: 293 GSPPPPRAGSPPPPPPPRGSP---PTGSLP----PPQAGGSPPPAGTGSPPPPPRQKRQA 345
Query: 595 PERQPPLGFPLAESP 551
PER PP G P SP
Sbjct: 346 PERSPPTGSPPTGSP 360
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = -2
Query: 751 PPPLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQP--- 581
P P KP+ S P PF N + F P P+ P P L P+ P
Sbjct: 150 PMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPIPK 209
Query: 580 PLGFP 566
P+ FP
Sbjct: 210 PMPFP 214
>AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical
protein Y113G7A.3 protein.
Length = 821
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/71 (35%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Frame = +3
Query: 552 GLSASGNPKGGCLSGPRGDVGTGETPNSGEVPLG-LVGQSLKGLKPIRLTNGAPKGQEAL 728
G S P G P G G SG PLG L G L G P G P A
Sbjct: 210 GGGLSQRPAAGAPGAPAGAPGAPMAMGSGAAPLGQLPGSGLPGGLP---RGGGPPLPGAA 266
Query: 729 TGL-RKGGGFP 758
G+ GGG P
Sbjct: 267 QGIVAPGGGAP 277
>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
protein F54F11.2 protein.
Length = 1589
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 692 SNWFQPFEGLADQSQGNFSGIWGLPSSNVAPWSGKATPFRVPASRKPLV--HWPGSPGLG 519
S W Q +G AD++ F+G G+ ++ P T F +KP +WP S G
Sbjct: 596 SQWDQLVQGPADRT--GFNGPPGITNAWYQPELNSIT-FPAGILKKPFYDFNWPASVNFG 652
Query: 518 VMGLL 504
MG++
Sbjct: 653 AMGVI 657
>Z47808-4|CAA87772.1| 235|Caenorhabditis elegans Hypothetical
protein D2013.6 protein.
Length = 235
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 685 GFNPLRD-WPTNPRGTSPEFGVSPVPTSPLGPERQP 581
GFNP D +P P + +P P +GPER P
Sbjct: 169 GFNPTTDSFPDQPNPSRVFMSSAPPPYPGIGPERGP 204
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -2
Query: 754 NPPPLRKPVKASCPLGAPFVNRIG-FNPLRDWPTNPRGTSPEFGVS-PVP-TSPLG 596
NP R+P + P + +NP +PT RG+ P FG P P T P G
Sbjct: 306 NPTNTRQPSRPVPPTSDGHIEATTPYNPSAQYPTGKRGSHPGFGPQRPRPGTRPRG 361
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 552 GLSASGNPKGGCLSGPRGDVGTGET-PNSGEVPLGLVGQS 668
G++ G G GP GD GTG T +G VG S
Sbjct: 778 GVNTGGTGNGNGSGGPSGDTGTGPTGSGTGTGAAAAVGSS 817
>AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical
protein T08B2.5e protein.
Length = 184
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 655 NPRGTSPEFGVSP--VPTSPLGPE-RQPPLGFPLAESP 551
N P F P + T P+ P+ RQPP GFP+ +P
Sbjct: 74 NEEKKQPIFNQPPPVIQTRPVFPDFRQPPPGFPIMTTP 111
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 558 SASGNPKGGCLSGPRGDVGTGETPNSGEVPLGLVG 662
+A G+ G CL GP G VGT P P G+ G
Sbjct: 89 AAGGSCSGCCLPGPAGPVGTPGKPGRPGKP-GVAG 122
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 27.9 bits (59), Expect = 9.7
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 552 GLSASGNPKGGC-LSGPRGDVGTGETPNS--GEVPLGLVGQ-SLKGLKPIRLTNGAP--K 713
G S KG L GP+GD G TP S + G +GQ KG K + +G P K
Sbjct: 496 GTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQK 555
Query: 714 GQEALTGLRKG 746
GQ+ G +KG
Sbjct: 556 GQDGQPG-QKG 565
>Z49071-8|CAA88878.2| 322|Caenorhabditis elegans Hypothetical
protein T22C8.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 419 PVSDNGVIGRIRQVIVSV-IPFLAWGGRARKVIVVRDAGH 303
P+++ G +G V V + IPF AWGG A + VRD H
Sbjct: 176 PLNEEGAVG----VGVGLGIPFGAWGGGASTSVGVRDYFH 211
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 237 ESPDAIQPVPQPNVAGMAPSNLVPCVSNYDDLSCPTSPGQEGDYANYYLTNSANN 401
+ P +Q PQP G + S P NYD++S +S +NY N + N
Sbjct: 392 QQPPLLQNTPQPYYYGSSVST-TP--RNYDEMSTASSNSTHTTTSNYNNRNGSRN 443
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 237 ESPDAIQPVPQPNVAGMAPSNLVPCVSNYDDLSCPTSPGQEGDYANYYLTNSANN 401
+ P +Q PQP G + S P NYD++S +S +NY N + N
Sbjct: 294 QQPPLLQNTPQPYYYGSSVST-TP--RNYDEMSTASSNSTHTTTSNYNNRNGSRN 345
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,793,561
Number of Sequences: 27780
Number of extensions: 550617
Number of successful extensions: 1819
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1809
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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