Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0275.Seq
         (854 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    28   0.13 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   2.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.6  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   3.6  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   3.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
 Frame = +3

Query: 495 QRPQQSHHAQARRTWPMNQGLSASGNPKGG-----CLSGPRGDVGTGETPNSGEV 644
           Q+ QQ    Q ++ WPM +  +AS            +  P G V + E+  SGEV
Sbjct: 450 QQQQQQQQQQQQQHWPMEEEPAASWGSASDVTLDEAVKSPLGSVSSTESTCSGEV 504


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = +2

Query: 623  DPKFRRSSPGIGRPIPQRVETNSIDKRSPQRARSFNRFT*GGRVPLDPIPKTLGASTGR 799
            D  +R  S   GRP+P+R E       SP  +          R+   P P ++  +  R
Sbjct: 1351 DESYRGPSASGGRPVPERPERVPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRAGSR 1409


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 690 ELVSTL*GIGRPIPGELLRNLGS 622
           +++  L  I +PIP + L+NLG+
Sbjct: 35  DVIQLLQKISQPIPNQELQNLGA 57


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 492 REPDSRRRCTMNTGHC 445
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 492 REPDSRRRCTMNTGHC 445
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,015
Number of Sequences: 438
Number of extensions: 7677
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)