Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0273.Seq
         (795 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q653E7 Cluster: Putative uncharacterized protein P0623A...    34   3.6  
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha...    33   6.2  
UniRef50_Q2JHP1 Cluster: Xanthine dehydrogenase accessory factor...    33   8.3  
UniRef50_Q9C246 Cluster: Putative uncharacterized protein B18D24...    33   8.3  

>UniRef50_Q653E7 Cluster: Putative uncharacterized protein
           P0623A10.44; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0623A10.44 - Oryza sativa subsp. japonica (Rice)
          Length = 186

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = -2

Query: 305 SVKYQKRYSQ*NKRHPTAENNSGHRLSQECFLPEAMVHPGDTVVSGA*GPTQESPPPAST 126
           S++   R S  N  HP A  N G       ++ +A VH G+T V+    PT   PPPA  
Sbjct: 105 SMEATSRASNTNN-HPAATANEGMLSFSSAYVDDAAVH-GETAVARPRQPTASPPPPAPG 162

Query: 125 FKR 117
           +++
Sbjct: 163 WRQ 165


>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
           Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
           - Encephalitozoon cuniculi
          Length = 156

 Score = 33.5 bits (73), Expect = 6.2
 Identities = 26/76 (34%), Positives = 39/76 (51%)
 Frame = -2

Query: 371 IWSGVVAIYKYKTLVSVNANTNSVKYQKRYSQ*NKRHPTAENNSGHRLSQECFLPEAMVH 192
           ++ GVV   K +  + V AN   V Y K+Y + ++RH    N S H     CF  E M++
Sbjct: 67  LFKGVVKKMKAEKTIVVVANY--VHYSKKYKRYSRRH---TNFSVH--MSPCF--EGMIN 117

Query: 191 PGDTVVSGA*GPTQES 144
            GDTV+ G   P  ++
Sbjct: 118 VGDTVICGETRPLSKT 133


>UniRef50_Q2JHP1 Cluster: Xanthine dehydrogenase accessory factor,
           putative; n=2; Synechococcus|Rep: Xanthine dehydrogenase
           accessory factor, putative - Synechococcus sp. (strain
           JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
           B-Prime)
          Length = 287

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +1

Query: 130 DAGGGDSCVGPQAPLTTVSPGWTIASGRKHSWLNRW 237
           D  G  S  G Q  L   SP   +  GR H WL RW
Sbjct: 64  DGDGESSPAGMQVSLDLNSPPLGVCGGRMHIWLQRW 99


>UniRef50_Q9C246 Cluster: Putative uncharacterized protein
           B18D24.280; n=4; Sordariomycetes|Rep: Putative
           uncharacterized protein B18D24.280 - Neurospora crassa
          Length = 1091

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 330 QGLIFVNCNDTRPYSQVFYHQIVSAETYFPFSSYYGYL-SNMVTQYPDLRLNWFF 491
           QG++  + +D +P+ Q +   I SA T+ P  S  G+L S ++  YP   + W +
Sbjct: 354 QGVLVASNHDVQPFIQTYRKVITSANTFPPELSALGWLFSTLLALYPLRLVAWAY 408


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 881,865,843
Number of Sequences: 1657284
Number of extensions: 19256687
Number of successful extensions: 47054
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 45110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47035
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)