Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0273.Seq
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   10.0 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   10.0 

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 160  PQAPLTTVSPGWTIASGRKHSWLNRWPEL 246
            P+AP+  V PG  IA  R   W +R  E+
Sbjct: 964  PKAPMILVGPGTGIAPFRGF-WHHRLAEI 991


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = +3

Query: 324 RHQGLIFVNCNDTRPYSQVFYHQIVSAETYFPFSSYYGYLSNMVTQYPDLRL 479
           RHQ ++      +     VFY+  V A        Y   LS  V   PD +L
Sbjct: 103 RHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVIHRPDTKL 154


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = +3

Query: 324 RHQGLIFVNCNDTRPYSQVFYHQIVSAETYFPFSSYYGYLSNMVTQYPDLRL 479
           RHQ ++      +     VFY+  V A        Y   LS  V   PD +L
Sbjct: 103 RHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVIHRPDTKL 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,428
Number of Sequences: 438
Number of extensions: 5900
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)