Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0272.Seq
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.7  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   6.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   6.2  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.2  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +3

Query: 462 IALWENNKVYFKILNTNVTNTWYWESALTGTATIWXSESTASIVSEPSG 608
           +A W + KV  KI  T   ++W+ E+ +  T  +        I ++  G
Sbjct: 275 LAKWRDEKVAVKIFFTTEESSWFRETEIYQTVLMRNENILGFIAADIKG 323


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 384 DVQGDDGRPAYGDGKDKTSPRV 449
           D  GD GRPAY    D +  +V
Sbjct: 101 DRNGDGGRPAYSGNSDPSMDQV 122


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 709 SGSPHWPWGYXRAEL 753
           SGS HWP+   R+EL
Sbjct: 557 SGSEHWPFMTERSEL 571


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 709 SGSPHWPWGYXRAEL 753
           SGS HWP+   R+EL
Sbjct: 558 SGSEHWPFMTERSEL 572


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQ 375
           LP DS   L L V +  S  V LN++A+
Sbjct: 255 LPPDSGEKLTLGVTILLSLTVFLNLVAE 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,461
Number of Sequences: 2352
Number of extensions: 12655
Number of successful extensions: 84
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)