Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0271.Seq
(792 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-14
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 38 0.007
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 38 0.009
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.016
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 37 0.022
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.028
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.066
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 35 0.066
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.066
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.066
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 34 0.15
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 34 0.15
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 32 0.46
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 31 0.81
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.81
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.81
SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19) 31 1.1
SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17) 31 1.4
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.4
SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16) 30 1.9
SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11) 30 2.5
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 29 3.3
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19) 29 3.3
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 3.3
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 4.3
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 29 4.3
SB_39188| Best HMM Match : Ion_trans (HMM E-Value=4.9e-20) 29 5.7
SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017) 29 5.7
SB_5749| Best HMM Match : Gpi1 (HMM E-Value=7.8) 29 5.7
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17) 28 10.0
SB_28190| Best HMM Match : RVT_thumb (HMM E-Value=6.2) 28 10.0
SB_24170| Best HMM Match : rve (HMM E-Value=0.61) 28 10.0
SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32) 28 10.0
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 74.9 bits (176), Expect = 7e-14
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = +1
Query: 256 IIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR 435
I+YR YFG YDT + +L ++ +VIS+ + VT AG+ SYP DT+RRRMMM SG
Sbjct: 187 IVYRGFYFGLYDTLKPILLG-EDAGVVISFVLGYGVTVSAGLASYPIDTIRRRMMMTSGE 245
Query: 436 AKSDILYKNTIHCWATIAKTEG 501
A + YK +I C I K EG
Sbjct: 246 A---VKYKGSIDCTIQILKKEG 264
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 253
SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLYRGF +S G
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVG 185
Score = 32.3 bits (70), Expect = 0.46
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 498 GNLGFFKGAFSNVLRGTGGAFVLVLYDEIKKV 593
G + KGA +N+LRG GA VL +D+ K++
Sbjct: 264 GAMSLMKGAGANILRGMAGAGVLAGFDKFKEL 295
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 319 KNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 498
+ P+ V+ +YP D VRRRM M+ RA D YK+T+H +++I K E
Sbjct: 157 RELPVNFKLMCGSLAGAVSQTATYPLDVVRRRMQMKGIRA--DFAYKSTLHAFSSIVKLE 214
Query: 499 G 501
G
Sbjct: 215 G 215
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 80 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 232
T VYP+D +TR+ + ++ + +C K+ +++G IGLYRG
Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRG 976
Score = 35.9 bits (79), Expect = 0.038
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 388 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 501
YP D V+ RM Q +++ +YKN+I C+ + + EG
Sbjct: 932 YPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEG 969
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 80 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 232
T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 80 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRGF 235
T+ YPLD R+RLA V + + G+ + +IF ++ G++ LYRGF
Sbjct: 11 TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRGF 60
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 80 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFGVS 244
TS YPLD R R+ DG + +S N ++ DG+ GLYRG ++
Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRGLSIN 173
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 80 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 235
T+ YPLD R RLA +++++GL N ++I++ +G+ YRG+
Sbjct: 2 TAALLTYPLDMVRARLAI-----TQKKKYTGLINAFTRIYRDEGMRTFYRGY 48
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 36.3 bits (80), Expect = 0.028
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 98 YPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRG 232
YPL RTRL A KG GQ + + + + KI DG GLYRG
Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 95 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 253
+YPL+ +TRLA + GQ + GL + S I++ +G+ YRG S+ G
Sbjct: 248 IYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLFPSLLG 295
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 80 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 247
TSLC YP + ARTRL + G++++ + + + +G GLY G G V
Sbjct: 946 TSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGTHV 999
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 86 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 253
+C +P ++ +T+L D + + + G +C+ K K G++GLYRG + G
Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYG 108
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 35.1 bits (77), Expect = 0.066
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 250 RYIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT--VAGIISYPFDTVRRRMMM 423
R IY ++ G Y+ + +L +T + I V++ + I+ P D V+ R
Sbjct: 85 RQAIYSSTRLGAYEPIKNLLGATDSTSAALWKKIVAGVSSGVIGSAIATPTDLVKIRF-- 142
Query: 424 QSGRAKSDILYKNTIHCWATIAKTEG 501
Q+ + I YKN H + IAK EG
Sbjct: 143 QAVKIGETIPYKNMFHAFYKIAKKEG 168
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 89 CFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 235
C P+D RTR G+ + G +CI K + +G++ LY+GF
Sbjct: 227 CVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 35.1 bits (77), Expect = 0.066
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 98 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 232
YPLD R R+ + +G+G ++S + I +S+G IGL++G
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKG 742
Score = 32.7 bits (71), Expect = 0.35
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +2
Query: 161 EFSGLGNCISKIFKSDGLIGLYRGFGVSV 247
++SG+G ++KI++ +GL G ++G G ++
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNI 618
Score = 32.3 bits (70), Expect = 0.46
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 328 PIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 501
P+V VA +YP D VRRRM M+ G Y +T + I ++EG
Sbjct: 680 PVVAKLFCGAVAGAVAQSGTYPLDVVRRRMQMERGEGM--FKYSSTWDGFKVIVRSEG 735
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 35.1 bits (77), Expect = 0.066
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +2
Query: 80 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 235
T+ YPLD R+RLA V + G + CIS K G LY+GF
Sbjct: 77 TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGF 126
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 370 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 501
V+ I+YP D VRRRM + +G Y I+ + K +G
Sbjct: 185 VSQTIAYPLDVVRRRMQL-AGAVPDGHKYNTCINTLVNVYKDDG 227
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 35.1 bits (77), Expect = 0.066
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGFGVSVQG 253
+PLD + RL G++ F+G +C K +++G GLY+G + G
Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAPITG 97
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = +2
Query: 101 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 235
P+D A+TR+ ++ DG+ E+ G + +++I +++G+ L++GF
Sbjct: 113 PVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 RTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 238
R + V K G + + GLG+C+ +++++ GL G+++G G
Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 343 WAIAQTVTTVAGIISYPFDTVRRRMMMQS---GRAKSDILYKNTIHCWATIAKTEG 501
+ + T + A + P + V+ RM +Q R + Y+N H TIAK EG
Sbjct: 8 FVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEG 63
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 31.5 bits (68), Expect = 0.81
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 370 VAGIISYPFDTVRRRMMMQSGRAKSD--ILYKNTIHCWATIAKTEG 501
V I P D + +M +Q RA+S I Y+N H TIA+T G
Sbjct: 214 VVAFIEGPIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYG 259
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 101 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 244
PLD R + + K G + G +C+ +I++ G+ G+Y+G V+
Sbjct: 157 PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 31.5 bits (68), Expect = 0.81
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 155 QREFSGLGNCISKIFKSDGLIGLYRGFGVS 244
Q ++G +C+ K+F S+GL G +RG ++
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAIT 323
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 83 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 232
S YP+D ++ AD G Q +++G +C+ KI+ S G+ +G
Sbjct: 371 SWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 164 FSGLGNCISKIFKSDGLIGLYRGFGVSVQG 253
++G+ +C +I K + ++GLY+G + G
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAG 220
>SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 172 SRKLHQQDLQVRRSDRSVQ-RFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISW- 345
S+K + L V R V +F + + + SY G T++G+ PDP+ +I
Sbjct: 537 SQKWMENCLMVLERSREVGLKFNPSKVKLRVDEVSYVGHRLTSQGLQPDPEKIQAIIDMP 596
Query: 346 --AIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 483
+ V + G ++Y ++ + +Q S +L K+ + W T
Sbjct: 597 PPTDKEGVQRLIGTVNYLDKFIQNKAEIQG--PISQLLQKDAVFVWDT 642
>SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19)
Length = 1451
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 172 SRKLHQQDLQVRRSDRSVQ-RFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISW- 345
S+K + L V R V +F + + + SY G T++G+ PDP+ +I
Sbjct: 537 SQKWMENCLMVLERSREVGLKFNPSKVKLRVDEVSYVGHRLTSQGLQPDPEKIQAIIDMP 596
Query: 346 --AIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 483
+ V + G ++Y ++ + +Q S +L K+ + W T
Sbjct: 597 PPTDKEGVQRLIGTVNYLDKFIQNKAEIQG--PISQLLQKDAVFVWDT 642
>SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17)
Length = 609
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 184 HQQDLQVRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPI 333
H+ ++RS +F +A+ + SY G TA G+ PDP+ +P+
Sbjct: 524 HKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLFTADGLKPDPEKSPM 573
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 101 PLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 232
PLD + RL A G+ F G +C K + +GL GLY+G
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16)
Length = 656
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 202 VRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISW---AIAQTVTTV 372
+ RS +F + + + SY G T++G+ PDP+ VI + V +
Sbjct: 35 LERSREVGLKFNPSKVKLRVDEVSYVGHRLTSQGLQPDPEKIKAVIDMPPPTDKEGVQRL 94
Query: 373 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 483
G ++Y ++ + +Q S +L K+ I W T
Sbjct: 95 IGTVNYLDKFIKNKAEIQG--PISQLLQKDAIFVWDT 129
>SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1451
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +1
Query: 202 VRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISW---AIAQTVTTV 372
+ RS +F + + + + SY G T++G+ PDP+ VI + V +
Sbjct: 495 LERSREVGLKFNPSKVKLRVDKVSYVGHRLTSQGLQPDPEKIKAVIDMPPPRDKEGVQRL 554
Query: 373 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 483
G ++Y ++ + +Q S +L K+ I W T
Sbjct: 555 IGTVNYLDKFIQNKAEIQG--PISQLLQKDAIFVWDT 589
>SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)
Length = 1702
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +1
Query: 175 RKLHQQDLQVRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISWAIA 354
R LH+ + R +R++ RF + +Y + + SY G + G PDP ++ +
Sbjct: 1256 RALHK--VLERARERNI-RFNKSKIQYRLDKVSYMGEVVSNNGFTPDPAKVSAILKMPVP 1312
Query: 355 Q---TVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 483
Q + + G+I+Y + Q+ ++ ++ +HC T
Sbjct: 1313 QCKKDLQRLLGMINYLSKAYDTEALTQTNDMHDEM--EHMVHCIMT 1356
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 202 VRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISW---AIAQTVTTV 372
+ RS +F + + + SY G T++G+ PDP+ +I + V +
Sbjct: 340 LERSREVGLKFNPSKVKLRVDEVSYVGHRLTSQGLQPDPEKIKAIIDMPPPTDKEGVQRL 399
Query: 373 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 483
G ++Y ++ + +Q S +L K+ I W T
Sbjct: 400 IGTVNYLDKFIQNKAEIQG--PISQLLQKDAIFVWDT 434
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 137 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 15
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19)
Length = 1053
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 202 VRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISW---AIAQTVTTV 372
+ RS +F + + + SY G T++G+ PDP+ +I + V +
Sbjct: 826 LERSREVGLKFNPSKVKLRVDEVSYVGHRLTSQGLQPDPEKIKAIIDMPPPTDKEGVQRL 885
Query: 373 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 483
G ++Y ++ + +Q S +L K+ I W T
Sbjct: 886 IGTVNYLDKFIQNKAEIQG--PISQLLQKDAIFVWDT 920
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 202 VRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISW---AIAQTVTTV 372
+ RS +F + + + SY G T++G+ PDP+ +I + V +
Sbjct: 340 LERSREVGLKFNPSKVKLRVDEVSYVGHRLTSQGLQPDPEKIKAIIDMPPPTDKEGVQRL 399
Query: 373 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 483
G ++Y ++ + +Q S +L K+ I W T
Sbjct: 400 IGTVNYLDKFIQNKAEIQG--PISQLLQKDAIFVWDT 434
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 174 RPENSRWPSPLPTSAARRVRAKSRGYTK 91
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 137 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQRRR 3
HR+ + RSR R R+ R R +SSC+RRR
Sbjct: 275 HRKHRSHSRSRSPRSKRSRSPRKRRRSKSRSPRRYRDSSSCRRRR 319
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 179 NCISKIFKSDGLIGLYRGFG 238
+C I++ +G+ G YRGFG
Sbjct: 332 DCFRTIYQQEGIFGFYRGFG 351
>SB_39188| Best HMM Match : Ion_trans (HMM E-Value=4.9e-20)
Length = 551
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 184 HQQDLQVRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISWA 348
H +D +R + +V+ FR +II G+Y A + D K I SWA
Sbjct: 147 HARDNDLRSNTTTVRAFRYSAMSFIIIHLFACGWYYLACDNMADGKGKCITKSWA 201
>SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017)
Length = 1243
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +3
Query: 441 ERYPVQEHHPLLGYHCQDRGNLGFFKGAFSNVLRGTGGAFVLVLYDEIKKVCKSNVRIVT 620
E Y Q+ ++ Y C + ++ F + + + G +++ KKV K IVT
Sbjct: 329 EHYSEQDQESIIRYICDNEEHIAFVLDGYDELPSSSKGPLDMII--NAKKVLKQCYVIVT 386
Query: 621 IISNVIP 641
N IP
Sbjct: 387 SRMNQIP 393
>SB_5749| Best HMM Match : Gpi1 (HMM E-Value=7.8)
Length = 226
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 184 HQQDLQVRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISWA 348
H +D +R + +V+ FR +II G+Y A + D K I SWA
Sbjct: 167 HARDNDLRSNTTTVRAFRYSAMSFIIIHLFACGWYYLACDNMADGKGKCITKSWA 221
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 128 RDGYVRSRGGTRSTERWLRRHHRRPDY-QRSNARTASSCQR 9
+DG V +RG TR + R H RR + R + R +S+ R
Sbjct: 591 QDGQVTTRGHTRRSSNTTRSHTRRSSHTTRGHTRRSSNTTR 631
>SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17)
Length = 635
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 184 HQQDLQVRRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPK 321
H+ ++RS + +F +A+ + SY G TA G+ PDP+
Sbjct: 334 HKMIAVLKRSRKIGLKFNPRKAKLRVPEVSYVGHLFTADGLKPDPE 379
>SB_28190| Best HMM Match : RVT_thumb (HMM E-Value=6.2)
Length = 315
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 205 RRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVIS 342
R DR++ RF + +Y + + SY G + +G PDP + +
Sbjct: 39 RARDRNI-RFNKEKIQYRLDKVSYMGEVVSEKGFTPDPSKVSAIFN 83
>SB_24170| Best HMM Match : rve (HMM E-Value=0.61)
Length = 768
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 205 RRSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVIS 342
R DR++ RF + +Y + + SY G + +G PDP + +
Sbjct: 252 RARDRNI-RFNKEKIQYRLDKVSYMGEVVSEKGFTPDPSKVSAIFN 296
>SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32)
Length = 823
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +1
Query: 208 RSDRSVQRFRCVRARYIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVA 375
+S+ S+Q + Y + +FG+ + G+ PDPK V++ QT++T +
Sbjct: 631 KSEGSLQTLNKSKCEYGKEKLEFFGYVFSKDGISPDPKKVEDVVN---LQTLSTAS 683
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,894,138
Number of Sequences: 59808
Number of extensions: 431686
Number of successful extensions: 1489
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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