Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0271.Seq
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   160   1e-41
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   160   1e-41
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    26   0.46 
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    26   0.46 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.4  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   7.5  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  160 bits (389), Expect = 1e-41
 Identities = 71/82 (86%), Positives = 77/82 (93%)
 Frame = +1

Query: 256 IIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR 435
           IIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGR
Sbjct: 187 IIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGR 246

Query: 436 AKSDILYKNTIHCWATIAKTEG 501
           AKS+ILYK+T+HCWATI KTEG
Sbjct: 247 AKSEILYKSTLHCWATIYKTEG 268



 Score =  132 bits (320), Expect = 3e-33
 Identities = 61/84 (72%), Positives = 67/84 (79%)
 Frame = +2

Query: 2   LGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGN 181
           LGGVDK TQF RYF            TSLCFVYPLDFARTRLAADVGK  G+REF+GLGN
Sbjct: 102 LGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGN 161

Query: 182 CISKIFKSDGLIGLYRGFGVSVQG 253
           C++KIFK+DG+ GLYRGFGVSVQG
Sbjct: 162 CLTKIFKADGITGLYRGFGVSVQG 185



 Score = 56.0 bits (129), Expect = 4e-10
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +3

Query: 498 GNLGFFKGAFSNVLRGTGGAFVLVLYDEIKKV 593
           G   FFKGAFSN+LRGTGGA VLVLYDEIK +
Sbjct: 268 GGNAFFKGAFSNILRGTGGALVLVLYDEIKNL 299



 Score = 27.5 bits (58), Expect = 0.15
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +2

Query: 98  YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 232
           YP D  R R+    G+   +  +    +C + I+K++G    ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275



 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +1

Query: 388 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 501
           YP D  R R+    G+A  +  +    +C   I K +G
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADG 171


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  160 bits (389), Expect = 1e-41
 Identities = 71/82 (86%), Positives = 77/82 (93%)
 Frame = +1

Query: 256 IIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR 435
           IIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGR
Sbjct: 187 IIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGR 246

Query: 436 AKSDILYKNTIHCWATIAKTEG 501
           AKS+ILYK+T+HCWATI KTEG
Sbjct: 247 AKSEILYKSTLHCWATIYKTEG 268



 Score =  132 bits (320), Expect = 3e-33
 Identities = 61/84 (72%), Positives = 67/84 (79%)
 Frame = +2

Query: 2   LGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGN 181
           LGGVDK TQF RYF            TSLCFVYPLDFARTRLAADVGK  G+REF+GLGN
Sbjct: 102 LGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGN 161

Query: 182 CISKIFKSDGLIGLYRGFGVSVQG 253
           C++KIFK+DG+ GLYRGFGVSVQG
Sbjct: 162 CLTKIFKADGITGLYRGFGVSVQG 185



 Score = 56.0 bits (129), Expect = 4e-10
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +3

Query: 498 GNLGFFKGAFSNVLRGTGGAFVLVLYDEIKKV 593
           G   FFKGAFSN+LRGTGGA VLVLYDEIK +
Sbjct: 268 GGNAFFKGAFSNILRGTGGALVLVLYDEIKNL 299



 Score = 27.5 bits (58), Expect = 0.15
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +2

Query: 98  YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 232
           YP D  R R+    G+   +  +    +C + I+K++G    ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275



 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +1

Query: 388 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 501
           YP D  R R+    G+A  +  +    +C   I K +G
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADG 171


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 611 SYVRFTDLLDLIIQDEHEGTTSTSE 537
           +Y  F DL D II+D H G   T +
Sbjct: 57  AYTLFADLFDPIIEDYHGGFKKTDK 81


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 611 SYVRFTDLLDLIIQDEHEGTTSTSE 537
           +Y  F DL D II+D H G   T +
Sbjct: 73  AYTLFADLFDPIIEDYHGGFKKTDK 97


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -3

Query: 655 NWLRHGITLEIMVTILTLDLQTFLISSYKTSTKAPPVPLRTLEKAPL 515
           N  +  I LE   T    +    L++++KT T+ P    + LEK P+
Sbjct: 111 NTCQPSIPLEPDFTSDVTERDNHLVNAFKTLTQEPKNTNKFLEKGPV 157


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 638 NHIRNYGNNSYVRFTDLLDLIIQDE 564
           N+  NY NN+Y  +  L   II  E
Sbjct: 336 NNYNNYNNNNYNNYKKLYYNIINIE 360


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,473
Number of Sequences: 438
Number of extensions: 4030
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)