Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0269.Seq
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        25   0.77 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.1  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.5  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 314 GCKVGTC*ASLSSFNICKSVSSLHCQ 237
           GCK G C   ++S  +C + S+L  Q
Sbjct: 139 GCKKGVCTMEINSDTMCVTFSNLGIQ 164


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 261 ECFFPALSSPRNKSLPDFFHRPRNPNTPV 175
           + F    S  +NKSL  F    RN +TP+
Sbjct: 406 DTFLDLWSDYQNKSLAAFDFVARNSDTPI 434


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -2

Query: 508 ASRQ*ATSLVQPWTPADVAGXTRRPGTLSRPPRGSSRATH 389
           +SR   TS     T A        PG  S+PP  +S   H
Sbjct: 97  SSRSVMTSCSSVPTTASYGSDLYFPGATSQPPTDNSHVHH 136


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 427 VFLVDACXRPRLPESKAELDSLLTDETPVT 516
           +FL   C  PRL        +  TDE  VT
Sbjct: 15  IFLSSMCLDPRLNSKIQVSGASTTDECQVT 44


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
          protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 78 VICYVVKWII 49
          VICYV  W I
Sbjct: 26 VICYVASWAI 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,084
Number of Sequences: 336
Number of extensions: 2847
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)