Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0269.Seq
(689 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 133 3e-32
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 57 2e-09
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 54 1e-08
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 54 3e-08
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 29 0.63
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 28 1.1
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 27 1.9
SPCC11E10.04 |||mitochondrial ATPase expression protein homolog|... 26 4.5
SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130 |S... 26 5.9
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 26 5.9
SPAC1F8.04c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.9
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.9
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 25 7.8
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 133 bits (321), Expect = 3e-32
Identities = 69/115 (60%), Positives = 80/115 (69%)
Frame = +1
Query: 202 MEKVGQALVSGT*QCREETLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQ 381
+ K + L G + TLLHMLK+DRLA PTLHPTSEEL+IG++RFTTFDLGGHQQ
Sbjct: 17 VNKHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQ 76
Query: 382 ARRVXRDYFPAVDAIVFLVDACXRPRLPESKAELDSLLTDETPVTALC*FSGNKI 546
ARR+ RDYFP V+ IV+LVD C RL ESKAELD+LL E GNKI
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKI 131
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +2
Query: 155 MFILDWFTGVLGFLGLWKKSGKLLFLGLDNAGK 253
MFI++WF L LGL K K+LFLGLDNAGK
Sbjct: 1 MFIINWFYDALAMLGLVNKHAKMLFLGLDNAGK 33
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 57.2 bits (132), Expect = 2e-09
Identities = 32/107 (29%), Positives = 54/107 (50%)
Frame = +1
Query: 223 LVSGT*QCREETLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVXRD 402
L+ G + T+L+ LK + +PT+ E + ++ FT +D+GG + R + R
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRH 80
Query: 403 YFPAVDAIVFLVDACXRPRLPESKAELDSLLTDETPVTALC*FSGNK 543
YF I+F+VD+ R R+ E+ EL +L ++ AL NK
Sbjct: 81 YFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANK 127
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 54.4 bits (125), Expect = 1e-08
Identities = 29/100 (29%), Positives = 53/100 (53%)
Frame = +1
Query: 205 EKVGQALVSGT*QCREETLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQA 384
E+ + L+ G + T+L L ++ + + PT L + +RFT +D+GG +
Sbjct: 14 EREVRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQKTL 73
Query: 385 RRVXRDYFPAVDAIVFLVDACXRPRLPESKAELDSLLTDE 504
R ++YF + +AI+++VD+ RL E + L LL +E
Sbjct: 74 RNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEE 113
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 53.6 bits (123), Expect = 3e-08
Identities = 25/93 (26%), Positives = 52/93 (55%)
Frame = +1
Query: 223 LVSGT*QCREETLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVXRD 402
L+ G + T+L+ LK ++ +PT+ E ++ +++F +D+GG + R + R
Sbjct: 25 LMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRH 84
Query: 403 YFPAVDAIVFLVDACXRPRLPESKAELDSLLTD 501
YF ++F+VD+ R+ E++ EL +++D
Sbjct: 85 YFTGTKGLIFVVDSADSNRISEARQELHRIISD 117
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 29.1 bits (62), Expect = 0.63
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 72 ILQISAKTRDTLPLGLVINIVQFNYIQKCLSSTGSLECWDFLVYGKSRASSCFW 233
IL+ ++ TR+ L + ++ I++ L + GSL D L+ G S A FW
Sbjct: 633 ILRDASLTRNPLVYPSAKSSIKSIDIKRVLENVGSLNHEDILLIGSSNAKYSFW 686
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 277 DDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVXRDYFPAVDAIVFLV 438
DD L TL + ++ ++ FD+GG + RR F V++I+F V
Sbjct: 170 DDILRSRNSTLGISEISFTLDHLQIRMFDVGGQRTERRKWIYCFENVNSIIFCV 223
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 280 DRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVXRDYFPAVDAIVFLV 438
D L + T + E + + FD+GG + RR F V A++FLV
Sbjct: 213 DILHCRIKTTGISEETFLLNRHHYRFFDVGGQRSERRKWIHCFENVTALLFLV 265
>SPCC11E10.04 |||mitochondrial ATPase expression protein
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 443
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 75 LQISAKTRDTLPLGLVINIVQFNYIQKCLSSTGSLECWDFLV 200
LQI +D LG+ NIV + +I + TG+ +++V
Sbjct: 113 LQIKLILQDADRLGIQFNIVDYTHILRVAMYTGNKHILEYIV 154
>SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1206
Score = 25.8 bits (54), Expect = 5.9
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +3
Query: 63 QRNILQISAKTRDTLPLGLVINIVQFNYI 149
Q N++++ K DT+PL + +NI++ ++
Sbjct: 338 QGNVVELRLKYFDTVPLAVQLNILKTGFL 366
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 25.8 bits (54), Expect = 5.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 255 FFPALSSPRNKSLPDFFHRPRNPNTPVN 172
++PAL++P S+ D + P P +P+N
Sbjct: 259 YWPALAAPVYPSMKDVPNNPFTPFSPIN 286
>SPAC1F8.04c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 548 IKXGAATEDELRHXFNLVSAXPLXRXKGIKGPRLFPG 658
+K G+ T D++ LVS P + K ++G + PG
Sbjct: 25 VKDGSNTIDDIGKTDRLVSIYPNEKHKSLEGHIVMPG 61
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 246 ALSSPRNKSLPDFFHRPRNPNTPVNQS 166
A S N LP F P + ++PVNQS
Sbjct: 73 AEESDPNLKLPSFLAPPNDKDSPVNQS 99
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 686 HGKRLPAAPNPGKASDP*Y 630
H PAAPNP K+ P Y
Sbjct: 595 HNSEFPAAPNPVKSQVPYY 613
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,581,706
Number of Sequences: 5004
Number of extensions: 47576
Number of successful extensions: 124
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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