Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0268.Seq
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z67734-5|CAD56227.1|  424|Caenorhabditis elegans Hypothetical pr...    38   0.004
Z67734-4|CAB54182.1|  410|Caenorhabditis elegans Hypothetical pr...    38   0.004
AL032678-2|CAC35829.2|  424|Caenorhabditis elegans Hypothetical ...    38   0.004
AL032678-1|CAB54320.1|  410|Caenorhabditis elegans Hypothetical ...    38   0.004
Z68270-1|CAA92566.2|  458|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF100306-6|AAC68920.1|  427|Caenorhabditis elegans Hypothetical ...    29   2.5  

>Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical
           protein T10B10.2 protein.
          Length = 422

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +3

Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLGSAGGLTTXNISSXLXQRKLSQIGAYVSASGDR 431
           P+  + +AF+AGSRYE   + GLSH + +  G  T           LSQ G  + +   R
Sbjct: 41  PIAHLVLAFRAGSRYEKANQAGLSHTIRNFVGRDTQEYFGNTVVWTLSQTGGVLKSFTSR 100

Query: 432 EFIXYXL 452
           +     L
Sbjct: 101 DLFGVSL 107


>Z67734-5|CAD56227.1|  424|Caenorhabditis elegans Hypothetical
           protein VW06B3R.1b protein.
          Length = 424

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLGSAGGLTTXNISSXLXQRKLSQIGAYVSASGDREFI 440
           + +AF+AGSRY+P  + GL+H++ ++ G    N          +Q G  ++A  +R+ +
Sbjct: 62  IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVL 120


>Z67734-4|CAB54182.1|  410|Caenorhabditis elegans Hypothetical
           protein VW06B3R.1a protein.
          Length = 410

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLGSAGGLTTXNISSXLXQRKLSQIGAYVSASGDREFI 440
           + +AF+AGSRY+P  + GL+H++ ++ G    N          +Q G  ++A  +R+ +
Sbjct: 48  IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVL 106


>AL032678-2|CAC35829.2|  424|Caenorhabditis elegans Hypothetical
           protein VW06B3R.1b protein.
          Length = 424

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLGSAGGLTTXNISSXLXQRKLSQIGAYVSASGDREFI 440
           + +AF+AGSRY+P  + GL+H++ ++ G    N          +Q G  ++A  +R+ +
Sbjct: 62  IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVL 120


>AL032678-1|CAB54320.1|  410|Caenorhabditis elegans Hypothetical
           protein VW06B3R.1a protein.
          Length = 410

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLGSAGGLTTXNISSXLXQRKLSQIGAYVSASGDREFI 440
           + +AF+AGSRY+P  + GL+H++ ++ G    N          +Q G  ++A  +R+ +
Sbjct: 48  IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVL 106


>Z68270-1|CAA92566.2|  458|Caenorhabditis elegans Hypothetical
           protein ZC410.2 protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLGSAGGLTTXNISSXLXQRKLSQIGAYVSASGDREFIX 443
           + +   AGSRYE +   G +H L       T   +    + ++  IGA+++A   RE   
Sbjct: 53  IGVFIDAGSRYENEKNNGTAHFLEHMAFKGTPRRTRMGLELEVENIGAHLNAYTSRESTT 112

Query: 444 Y 446
           Y
Sbjct: 113 Y 113


>AF100306-6|AAC68920.1|  427|Caenorhabditis elegans Hypothetical
           protein T24C4.1 protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 255 VTRVTIAFKAGSRYEPQAELGLSH 326
           ++++ +AF+AGSRYE   + GL H
Sbjct: 41  ISQLILAFRAGSRYEKVTQPGLVH 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,690,090
Number of Sequences: 27780
Number of extensions: 149005
Number of successful extensions: 311
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 311
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)