Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0267.Seq
         (796 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12959| Best HMM Match : Peptidase_M16_C (HMM E-Value=1e-14)         44   1e-04
SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36)       35   0.066
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)                     33   0.35 
SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.47 
SB_25632| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.7  
SB_16340| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.7  
SB_55899| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  

>SB_12959| Best HMM Match : Peptidase_M16_C (HMM E-Value=1e-14)
          Length = 593

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 19/51 (37%), Positives = 33/51 (64%)
 Frame = +3

Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIG 404
           P++RV + F AGSRYE  + LG++H+LR+AA L         + ++++ +G
Sbjct: 49  PISRVGLFFDAGSRYETDSNLGITHMLRNAAYLLLDFKGKHFVGKRMALVG 99


>SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36)
          Length = 888

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSF-LIQRKLSQIGAYVSASGDREFI 440
           V +    GSRYE     G++HV+   A  +T    S   I ++L  +G     +  R+ I
Sbjct: 440 VGVVIDGGSRYEVDHPNGVTHVIEKMAFQSTAKFPSHDDIMQELEPVGGMADCTSFRDAI 499

Query: 441 YYTLEATQDKLNDALEILNNLV 506
            Y   +    L  A+E+L+  V
Sbjct: 500 VYGTSSFTSGLPLAVEVLSEAV 521


>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
          Length = 1296

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 36/133 (27%), Positives = 56/133 (42%)
 Frame = +3

Query: 36  REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKERC*DPIKCFT 215
           R D VN +  L   L+  +  E GI   RR LYS C+D+ +R       ER    +    
Sbjct: 135 RLDVVNLQEQLDMRLQQRQARETGICPVRRELYSQCFDELIRQVTINCAER--GLLLLRV 192

Query: 216 *QDVRSCFRQRFPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLS 395
             ++R        +   ++AF  G R   QAE G S + R    L         ++R+++
Sbjct: 193 RDEIRMTIAAYQTLYESSVAF--GMRKALQAEQGKSDMERKITELENDKRE---LERQVN 247

Query: 396 QIGAYVSASGDRE 434
           ++ A   A   RE
Sbjct: 248 ELKAKCDAIEKRE 260


>SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 863

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 570 IISYFRRGALSWSSHGL---NSWLKLSYSGSPVHHSICPVLLPKCNR*ILCLQK 418
           +  YFR  A+  SS  L   N WLKLS    P H  + P ++P  +R +  L K
Sbjct: 265 VFLYFRNTAIFRSSCKLPVTNFWLKLSTIKEPCHRPVTPTVIPIYSRRVYKLFK 318


>SB_25632| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 303

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = -1

Query: 343 AADRSTCDNPNSACGS*REPALKAIVTRVT--GNRCL 239
           AADR T D+PN++  S R+ AL+++    T  GN CL
Sbjct: 167 AADRETIDDPNTS-ESRRQEALQSLSCECTSMGNDCL 202


>SB_16340| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 330

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 123 DESFGCHFRKFLETLGSNATKAYDLRSLLFLRKSLG 16
           DE F    RKF+E + S   +  D+  L+ + KSLG
Sbjct: 26  DERFLFQSRKFMEMINSAVDRLNDISLLVMILKSLG 61


>SB_55899| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 173

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +1

Query: 187 DVRIQSSVLPNKTFVAALDNGSPLPVSQSPSKLALVMNHKLNWDCRMYYDQL 342
           D ++Q+   PN   +  L N +PLP+  +P++     NH+L  +C  ++D L
Sbjct: 87  DTKVQT---PNHFLLTVLLN-APLPL-WTPNRFVRGKNHRLQKNCTQFFDLL 133


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,449,782
Number of Sequences: 59808
Number of extensions: 483123
Number of successful extensions: 1070
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)