Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0267.Seq
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 70 1e-11
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 70 1e-11
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 70 1e-11
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 46 2e-04
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 46 2e-04
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 46 2e-04
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 44 6e-04
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 41 0.004
BC046117-1|AAH46117.1| 258|Homo sapiens DNALI1 protein protein. 35 0.29
BC039074-1|AAH39074.1| 258|Homo sapiens DNALI1 protein protein. 35 0.29
AL034379-10|CAI20553.1| 280|Homo sapiens dynein, axonemal, ligh... 35 0.29
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 69.7 bits (163), Expect = 1e-11
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +3
Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDR 431
PV+R+ + KAGSRYE + LG +H+LR + LTTK SSF I R + +G +S + R
Sbjct: 57 PVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATR 116
Query: 432 EFIYYTLEATQDKLNDALEILNNLVS 509
E + YT+E + ++ +E L N+ +
Sbjct: 117 ENMAYTVECLRGDVDILMEFLLNVTT 142
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 69.7 bits (163), Expect = 1e-11
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +3
Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDR 431
PV+R+ + KAGSRYE + LG +H+LR + LTTK SSF I R + +G +S + R
Sbjct: 57 PVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATR 116
Query: 432 EFIYYTLEATQDKLNDALEILNNLVS 509
E + YT+E + ++ +E L N+ +
Sbjct: 117 ENMAYTVECLRGDVDILMEFLLNVTT 142
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 69.7 bits (163), Expect = 1e-11
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +3
Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDR 431
PV+R+ + KAGSRYE + LG +H+LR + LTTK SSF I R + +G +S + R
Sbjct: 57 PVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATR 116
Query: 432 EFIYYTLEATQDKLNDALEILNNLVS 509
E + YT+E + ++ +E L N+ +
Sbjct: 117 ENMAYTVECLRGDVDILMEFLLNVTT 142
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 46.0 bits (104), Expect = 2e-04
Identities = 25/89 (28%), Positives = 44/89 (49%)
Frame = +3
Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDR 431
P V + GSR+E + G + L A TKN +++++ +GA+++A R
Sbjct: 67 PTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTR 126
Query: 432 EFIYYTLEATQDKLNDALEILNNLVSTKS 518
E Y ++A L A+E+L ++V S
Sbjct: 127 EHTAYYIKALSKDLPKAVELLGDIVQNCS 155
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 46.0 bits (104), Expect = 2e-04
Identities = 25/89 (28%), Positives = 44/89 (49%)
Frame = +3
Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDR 431
P V + GSR+E + G + L A TKN +++++ +GA+++A R
Sbjct: 67 PTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTR 126
Query: 432 EFIYYTLEATQDKLNDALEILNNLVSTKS 518
E Y ++A L A+E+L ++V S
Sbjct: 127 EHTAYYIKALSKDLPKAVELLGDIVQNCS 155
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 46.0 bits (104), Expect = 2e-04
Identities = 25/89 (28%), Positives = 44/89 (49%)
Frame = +3
Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDR 431
P V + GSR+E + G + L A TKN +++++ +GA+++A R
Sbjct: 67 PTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTR 126
Query: 432 EFIYYTLEATQDKLNDALEILNNLVSTKS 518
E Y ++A L A+E+L ++V S
Sbjct: 127 EHTAYYIKALSKDLPKAVELLGDIVQNCS 155
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 44.0 bits (99), Expect = 6e-04
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +3
Query: 282 AGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEAT 461
AGSRYE + G +H L A TK S ++ ++ +GA+++A RE Y +A
Sbjct: 87 AGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAF 146
Query: 462 QDKLNDALEILNNLVSTKS 518
L A+EIL +++ +
Sbjct: 147 SKDLPRAVEILADIIQNST 165
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +3
Query: 282 AGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEAT 461
AGSRYE + G +H A TK S ++ ++ +GA+++A RE Y +A
Sbjct: 78 AGSRYENEKNNGTAHFPEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAF 137
Query: 462 QDKLNDALEILNNLVSTKS 518
L A+EIL +++ +
Sbjct: 138 SKDLPRAVEILADIIQNST 156
>BC046117-1|AAH46117.1| 258|Homo sapiens DNALI1 protein protein.
Length = 258
Score = 35.1 bits (77), Expect = 0.29
Identities = 41/153 (26%), Positives = 68/153 (44%)
Frame = +3
Query: 36 REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKERC*DPIKCFT 215
R D V+ + L L+ + E GI RR LYS C+D+ +R ER +
Sbjct: 96 RMDVVHLQEQLDLKLQQRQARETGICPVRRELYSQCFDELIREVTINCAER--GLLLLRV 153
Query: 216 *QDVRSCFRQRFPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLS 395
++R + ++AF G R QAE G S + R A L T+ ++R+++
Sbjct: 154 RDEIRMTIAAYQTLYESSVAF--GMRKALQAEQGKSDMERKIAELETEKRD---LERQVN 208
Query: 396 QIGAYVSASGDREFIYYTLEATQDKLNDALEIL 494
+ A A+ RE +E + K N+ ++ L
Sbjct: 209 EQKAKCEATEKRESERRQVE--EKKHNEEIQFL 239
>BC039074-1|AAH39074.1| 258|Homo sapiens DNALI1 protein protein.
Length = 258
Score = 35.1 bits (77), Expect = 0.29
Identities = 41/153 (26%), Positives = 68/153 (44%)
Frame = +3
Query: 36 REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKERC*DPIKCFT 215
R D V+ + L L+ + E GI RR LYS C+D+ +R ER +
Sbjct: 96 RMDVVHLQEQLDLKLQQRQARETGICPVRRELYSQCFDELIREVTINCAER--GLLLLRV 153
Query: 216 *QDVRSCFRQRFPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLS 395
++R + ++AF G R QAE G S + R A L T+ ++R+++
Sbjct: 154 RDEIRMTIAAYQTLYESSVAF--GMRKALQAEQGKSDMERKIAELETEKRD---LERQVN 208
Query: 396 QIGAYVSASGDREFIYYTLEATQDKLNDALEIL 494
+ A A+ RE +E + K N+ ++ L
Sbjct: 209 EQKAKCEATEKRESERRQVE--EKKHNEEIQFL 239
>AL034379-10|CAI20553.1| 280|Homo sapiens dynein, axonemal, light
intermediate chain 1 protein.
Length = 280
Score = 35.1 bits (77), Expect = 0.29
Identities = 41/153 (26%), Positives = 68/153 (44%)
Frame = +3
Query: 36 REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKERC*DPIKCFT 215
R D V+ + L L+ + E GI RR LYS C+D+ +R ER +
Sbjct: 118 RMDVVHLQEQLDLKLQQRQARETGICPVRRELYSQCFDELIREVTINCAER--GLLLLRV 175
Query: 216 *QDVRSCFRQRFPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLS 395
++R + ++AF G R QAE G S + R A L T+ ++R+++
Sbjct: 176 RDEIRMTIAAYQTLYESSVAF--GMRKALQAEQGKSDMERKIAELETEKRD---LERQVN 230
Query: 396 QIGAYVSASGDREFIYYTLEATQDKLNDALEIL 494
+ A A+ RE +E + K N+ ++ L
Sbjct: 231 EQKAKCEATEKRESERRQVE--EKKHNEEIQFL 261
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,281,126
Number of Sequences: 237096
Number of extensions: 2259542
Number of successful extensions: 4145
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4145
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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