Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0267.Seq
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical pr...    49   3e-06
Z67734-5|CAD56227.1|  424|Caenorhabditis elegans Hypothetical pr...    49   4e-06
Z67734-4|CAB54182.1|  410|Caenorhabditis elegans Hypothetical pr...    49   4e-06
AL032678-2|CAC35829.2|  424|Caenorhabditis elegans Hypothetical ...    49   4e-06
AL032678-1|CAB54320.1|  410|Caenorhabditis elegans Hypothetical ...    49   4e-06
Z68270-1|CAA92566.2|  458|Caenorhabditis elegans Hypothetical pr...    43   2e-04
AF100306-6|AAC68920.1|  427|Caenorhabditis elegans Hypothetical ...    41   0.001
AC025726-19|AAK73925.1|  477|Caenorhabditis elegans Mitochondria...    33   0.24 
U13644-8|AAB52679.1|  471|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z69787-5|CAA93641.1|  129|Caenorhabditis elegans Hypothetical pr...    29   5.1  
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu...    29   5.1  
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.      29   5.1  

>Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical
           protein T10B10.2 protein.
          Length = 422

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 24/84 (28%), Positives = 42/84 (50%)
 Frame = +3

Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDR 431
           P+  + +AF+AGSRYE   + GLSH +R+  G  T+      +   LSQ G  + +   R
Sbjct: 41  PIAHLVLAFRAGSRYEKANQAGLSHTIRNFVGRDTQEYFGNTVVWTLSQTGGVLKSFTSR 100

Query: 432 EFIYYTLEATQDKLNDALEILNNL 503
           +    +L   ++  +  L +L  +
Sbjct: 101 DLFGVSLTIPRESTSVGLSVLGQV 124


>Z67734-5|CAD56227.1|  424|Caenorhabditis elegans Hypothetical
           protein VW06B3R.1b protein.
          Length = 424

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 22/80 (27%), Positives = 43/80 (53%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
           + +AF+AGSRY+P  + GL+H++R++ G    N     +    +Q G  ++A  +R+ + 
Sbjct: 62  IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLA 121

Query: 444 YTLEATQDKLNDALEILNNL 503
             +   +D+    L +L  L
Sbjct: 122 IEVNVVRDQSAVVLSLLGQL 141


>Z67734-4|CAB54182.1|  410|Caenorhabditis elegans Hypothetical
           protein VW06B3R.1a protein.
          Length = 410

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 22/80 (27%), Positives = 43/80 (53%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
           + +AF+AGSRY+P  + GL+H++R++ G    N     +    +Q G  ++A  +R+ + 
Sbjct: 48  IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLA 107

Query: 444 YTLEATQDKLNDALEILNNL 503
             +   +D+    L +L  L
Sbjct: 108 IEVNVVRDQSAVVLSLLGQL 127


>AL032678-2|CAC35829.2|  424|Caenorhabditis elegans Hypothetical
           protein VW06B3R.1b protein.
          Length = 424

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 22/80 (27%), Positives = 43/80 (53%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
           + +AF+AGSRY+P  + GL+H++R++ G    N     +    +Q G  ++A  +R+ + 
Sbjct: 62  IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLA 121

Query: 444 YTLEATQDKLNDALEILNNL 503
             +   +D+    L +L  L
Sbjct: 122 IEVNVVRDQSAVVLSLLGQL 141


>AL032678-1|CAB54320.1|  410|Caenorhabditis elegans Hypothetical
           protein VW06B3R.1a protein.
          Length = 410

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 22/80 (27%), Positives = 43/80 (53%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
           + +AF+AGSRY+P  + GL+H++R++ G    N     +    +Q G  ++A  +R+ + 
Sbjct: 48  IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLA 107

Query: 444 YTLEATQDKLNDALEILNNL 503
             +   +D+    L +L  L
Sbjct: 108 IEVNVVRDQSAVVLSLLGQL 127


>Z68270-1|CAA92566.2|  458|Caenorhabditis elegans Hypothetical
           protein ZC410.2 protein.
          Length = 458

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 23/85 (27%), Positives = 45/85 (52%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
           + +   AGSRYE +   G +H L   A   T   +   ++ ++  IGA+++A   RE   
Sbjct: 53  IGVFIDAGSRYENEKNNGTAHFLEHMAFKGTPRRTRMGLELEVENIGAHLNAYTSRESTT 112

Query: 444 YTLEATQDKLNDALEILNNLVSTKS 518
           Y  +   +KL+ +++IL++++   S
Sbjct: 113 YYAKCFTEKLDQSVDILSDILLNSS 137


>AF100306-6|AAC68920.1|  427|Caenorhabditis elegans Hypothetical
           protein T24C4.1 protein.
          Length = 427

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 21/85 (24%), Positives = 44/85 (51%)
 Frame = +3

Query: 255 VTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRE 434
           ++++ +AF+AGSRYE   + GL H +R+  G   ++     +    +  GA +++   R+
Sbjct: 41  ISQLILAFRAGSRYEKVTQPGLVHHVRNFVGRDAQSYPGLQLVWSSAASGANLNSFATRD 100

Query: 435 FIYYTLEATQDKLNDALEILNNLVS 509
                +   +D+   AL IL ++ +
Sbjct: 101 IFGVQISVARDQAAYALSILGHVAA 125


>AC025726-19|AAK73925.1|  477|Caenorhabditis elegans Mitochondrial
           processing peptidasealpha protein 1 protein.
          Length = 477

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISS-FLIQRKLSQIGAYVSASGDREFI 440
           V +A ++G RYE     G+S ++   A  ++++ SS   +  KL +    V     R+ +
Sbjct: 42  VGVAIESGCRYENGFPFGISRIVEKLAYNSSESFSSRDEVFAKLEENSGIVDCQSTRDTM 101

Query: 441 YYTLEATQDKLNDALEILNNLV 506
            Y     +D ++  + +L++ +
Sbjct: 102 MYAASCHRDGVDSVIHVLSDTI 123


>U13644-8|AAB52679.1|  471|Caenorhabditis elegans Hypothetical
           protein F56D2.1 protein.
          Length = 471

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 18/81 (22%), Positives = 42/81 (51%)
 Frame = +3

Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
           V +  + GSR+E +   G++H L       T   +S  ++ +L+ IGA +++  +R+   
Sbjct: 61  VGVWIETGSRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTA 120

Query: 444 YTLEATQDKLNDALEILNNLV 506
             ++A    +   ++IL +++
Sbjct: 121 VFVQAGAQDVEKVVDILADVL 141


>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
            R09E10.7 protein.
          Length = 1717

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +3

Query: 51   NHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKERC 191
            NH     Y+L+   TY+   Q  +RP++    DQ   P    +  RC
Sbjct: 1006 NHLSNAAYFLERCPTYQRRFQPGQRPVFPYRDDQAQEPVPESAPNRC 1052


>Z69787-5|CAA93641.1|  129|Caenorhabditis elegans Hypothetical
           protein C44C10.6 protein.
          Length = 129

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -1

Query: 562 IFQTRSIIMEFPWSELLVETKLFRISSASFNLSCVASK 449
           +F T + ++EFP S  +  TK+FR  +A  +  C+  +
Sbjct: 59  LFSTSNFVLEFPHSVSMFLTKVFRRVAAIESKKCIVGE 96


>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
           guidance protein 2,isoform a protein.
          Length = 2886

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 74  LPKVSKNLRKWHPKLSSPPLFVMLRSGATPKLR-RQ*RKMLGSNQVF 211
           LP + K L +W+ K        ML   ATP+LR +  +K+L  N +F
Sbjct: 113 LPPILKVLVEWYEKYDESLCLSMLSPIATPELRLKLHKKLLAVNYLF 159


>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
          Length = 2914

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 74  LPKVSKNLRKWHPKLSSPPLFVMLRSGATPKLR-RQ*RKMLGSNQVF 211
           LP + K L +W+ K        ML   ATP+LR +  +K+L  N +F
Sbjct: 113 LPPILKVLVEWYEKYDESLCLSMLSPIATPELRLKLHKKLLAVNYLF 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,303,091
Number of Sequences: 27780
Number of extensions: 353893
Number of successful extensions: 819
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)