Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0265.Seq
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79639-2|CAB01915.1|  367|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AL031633-27|CAA21029.2|  385|Caenorhabditis elegans Hypothetical...    29   2.9  
AC006673-5|AAF39919.2|  335|Caenorhabditis elegans Serpentine re...    28   9.0  

>Z79639-2|CAB01915.1|  367|Caenorhabditis elegans Hypothetical
           protein F54E4.2 protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 472 FYHTLSKITFDLAVPLLILIYT*AGKQNXYTKQIAFH 582
           F  TL  ++F LA+ LL+L +  + +QN    QI FH
Sbjct: 184 FISTLLPVSFILALDLLVLCFRPSRQQNDPLLQIVFH 220


>AL031633-27|CAA21029.2|  385|Caenorhabditis elegans Hypothetical
           protein Y39A1A.17 protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
 Frame = -1

Query: 424 VNVHTYISMKNIIN--VAC--ILQRLSVLHCKMFDLRYYV-DVFKN 302
           V+ + Y+  +NII   + C  +L  L +L C M D  Y++ +VF+N
Sbjct: 153 VSCNRYLKKRNIIKLYIECDMVLPELQLLDCSMTDFVYFIFEVFQN 198


>AC006673-5|AAF39919.2|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein8 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 351 STERRCRMHATFIIFFIDIYVCTFT*SENANVNH 452
           S  RRC M+  ++ F   ++VC FT     ++ H
Sbjct: 127 SIARRCVMYLRYMFFICVVFVCIFTILSYPDLKH 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,857,118
Number of Sequences: 27780
Number of extensions: 322994
Number of successful extensions: 534
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)