Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0263.Seq
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0146 + 14389350-14390372                                         33   0.29 
03_02_0359 - 7788382-7788522,7788931-7789837,7791227-7791337,779...    30   2.0  

>07_03_0146 + 14389350-14390372
          Length = 340

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = -1

Query: 580 IIYHG*VAPYIEGVCTGIEVPPIFHSSDLLVSALYSCRAMPSASQ---HMPAGMTTSPRS 410
           +IY G +AP++ GV   +E+ P FH+    +   Y    + + S    H+P     S R 
Sbjct: 142 VIYPGQIAPHVAGVTGSLEISPGFHTMTSSIDFNYYSSPVNTVSHTTPHIPNAYNDSNRR 201

Query: 409 SQP 401
             P
Sbjct: 202 YSP 204


>03_02_0359 -
           7788382-7788522,7788931-7789837,7791227-7791337,
           7791437-7791507,7791582-7791659,7792564-7792770,
           7792867-7793046,7793249-7793471,7794133-7794453,
           7794538-7795109
          Length = 936

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/62 (29%), Positives = 25/62 (40%)
 Frame = -2

Query: 417 QEVANHYCQCHLWEWTKSWVWFQMSIFDGSVC*RSEQRTERETALIEALLVTFFRALISS 238
           Q   NH       EWT +W  FQ S+FD   C R +  T         + V     ++S 
Sbjct: 271 QNRRNHLILPKALEWTLNWCIFQ-SMFDSKFCVRKDFLTSPAVLKKRLVFVGISMLILSP 329

Query: 237 CV 232
           C+
Sbjct: 330 CL 331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,723,943
Number of Sequences: 37544
Number of extensions: 569579
Number of successful extensions: 1324
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)