Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0260.Seq
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 36 0.033
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 36 0.033
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.077
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.077
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.077
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 34 0.13
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.18
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 33 0.24
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 33 0.31
AF003151-6|AAK18909.1| 314|Caenorhabditis elegans Collagen prot... 33 0.31
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 32 0.41
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 32 0.41
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z68009-4|CAA92006.1| 152|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.95
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 31 0.95
U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protei... 31 0.95
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 0.95
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 31 1.3
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 31 1.3
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 31 1.3
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 30 2.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.2
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 30 2.2
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 2.2
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 2.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.2
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z49967-4|CAA90250.1| 287|Caenorhabditis elegans Hypothetical pr... 29 2.9
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 29 2.9
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 2.9
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 29 3.8
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 3.8
U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protei... 29 3.8
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 3.8
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 29 3.8
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 29 3.8
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 3.8
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 29 3.8
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 29 3.8
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 29 3.8
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 29 3.8
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 29 3.8
CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical ... 29 3.8
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 29 3.8
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 3.8
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 29 3.8
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 29 5.1
U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen prote... 29 5.1
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 28 6.7
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 28 6.7
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 28 6.7
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 28 6.7
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 28 6.7
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 6.7
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 28 8.9
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 28 8.9
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 28 8.9
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 28 8.9
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 28 8.9
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 8.9
AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of el... 28 8.9
AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of el... 28 8.9
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 665 PGPT--RGLPGETGPETWNFREKFPG--NPRGEPGFPPGGNPRGQLGE 796
PGP RG PG TGP+ + PG P G PG P G PRG G+
Sbjct: 213 PGPKGPRGTPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGPRGPPGD 260
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 35.9 bits (79), Expect = 0.033
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2
Query: 635 GSHPWGAWKTPGPTRGLPGETGPE---TWNFREKFPG--NPRGEPGFPPGGNPRGQLG 793
G P G PGP RG PGE GPE R+ +PG P+GEPG G G+ G
Sbjct: 256 GERPLGR---PGP-RGPPGEAGPEGPQGPTGRDAYPGQSGPQGEPGLQGYGGAAGEDG 309
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 641 HPWGAW--KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRG 784
+P+G + P P P P N + KFPG + FP GG PRG
Sbjct: 90 NPYGGYGASQPAPPEKFPDGI-PNGGN-QPKFPGGGFPDGPFPNGGGPRG 137
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPGNP--RGEPGFPPGG--NPRGQLGE 796
G+PG+ GP + PG+P +G+ G P G PRG GE
Sbjct: 229 GMPGDCGPPGAPGSDGKPGSPGGKGDDGERPLGRPGPRGPPGE 271
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 35.9 bits (79), Expect = 0.033
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2
Query: 635 GSHPWGAWKTPGPTRGLPGETGPE---TWNFREKFPG--NPRGEPGFPPGGNPRGQLG 793
G P G PGP RG PGE GPE R+ +PG P+GEPG G G+ G
Sbjct: 256 GERPLGR---PGP-RGPPGEAGPEGPQGPTGRDAYPGQSGPQGEPGLQGYGGAAGEDG 309
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 641 HPWGAW--KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRG 784
+P+G + P P P P N + KFPG + FP GG PRG
Sbjct: 90 NPYGGYGASQPAPPEKFPDGI-PNGGN-QPKFPGGGFPDGPFPNGGGPRG 137
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPGNP--RGEPGFPPGG--NPRGQLGE 796
G+PG+ GP + PG+P +G+ G P G PRG GE
Sbjct: 229 GMPGDCGPPGAPGSDGKPGSPGGKGDDGERPLGRPGPRGPPGE 271
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.077
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +2
Query: 635 GSHPWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPR 781
GS P G+ T P RG PG++ E+ RE PRG P P G PR
Sbjct: 347 GSPPTGSPPTGRPPRGGPGKSSEESSESRE----GPRGGPRGGPRGGPR 391
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.077
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +2
Query: 635 GSHPWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPR 781
GS P G+ T P RG PG++ E+ RE PRG P P G PR
Sbjct: 368 GSPPTGSPPTGRPPRGGPGKSSEESSESRE----GPRGGPRGGPRGGPR 412
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.077
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +2
Query: 635 GSHPWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPR 781
GS P G+ T P RG PG++ E+ RE PRG P P G PR
Sbjct: 353 GSPPTGSPPTGRPPRGGPGKSSEESSESRE----GPRGGPRGGPRGGPR 397
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Frame = +2
Query: 662 TPGPTRGLPGETG---PETWNFREKFPGNPR-----GEPGFPPGGNPRGQLGE 796
TPGP G PGETG P+ + PG P G PG P PRGQ GE
Sbjct: 179 TPGPV-GEPGETGGPGPQGRPGQRGEPGQPGTVHTPGNPGRPGPQGPRGQQGE 230
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 745 PGIARKLFPEIPGFRARFPREPAGWPRGFPGPP 647
PG+A + +IPG + P P G PRG GPP
Sbjct: 128 PGVALLVTHDIPGGCIKCPAGPRG-PRGDAGPP 159
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 33.5 bits (73), Expect = 0.18
Identities = 32/82 (39%), Positives = 35/82 (42%)
Frame = +2
Query: 551 AIGXEXPE*APGTWFPFGAWFRIXGGLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKF 730
A+G P+ PG P G G L G G PGP RG PGE GP+ R
Sbjct: 146 AVGGPGPKGPPGP--PGGP-----GELGGPGRGGNRGPPGP-RGPPGEAGPDGEGGRPGQ 197
Query: 731 PGNPRGEPGFPPGGNPRGQLGE 796
G R P P G P GQ GE
Sbjct: 198 AGQTRSAPS--PPGQP-GQPGE 216
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 33.5 bits (73), Expect = 0.18
Identities = 32/82 (39%), Positives = 35/82 (42%)
Frame = +2
Query: 551 AIGXEXPE*APGTWFPFGAWFRIXGGLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKF 730
A+G P+ PG P G G L G G PGP RG PGE GP+ R
Sbjct: 146 AVGGPGPKGPPGP--PGGP-----GELGGPGRGGNRGPPGP-RGPPGEAGPDGEGGRPGQ 197
Query: 731 PGNPRGEPGFPPGGNPRGQLGE 796
G R P P G P GQ GE
Sbjct: 198 AGQTRSAPS--PPGQP-GQPGE 216
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +2
Query: 665 PGPTRGLPGETG------PETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
PGP RG PGETG P+ +K P PRG PG P+G G
Sbjct: 222 PGP-RGPPGETGDEGEGGPDGIPMEKKSPPGPRGPPGPAGPDGPQGPEG 269
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFREKFPGNPRGE-PGFPPGGNPRGQLG 793
PGP G+PG+ GP+ N P P G+ P PPG P G G
Sbjct: 128 PGPA-GVPGQPGPKGPNGNPGAPAQPGGQGPPGPPG--PAGSAG 168
>AF003151-6|AAK18909.1| 314|Caenorhabditis elegans Collagen protein
52 protein.
Length = 314
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
GLPG TG W FPG P G G PPG N +G
Sbjct: 199 GLPGPTGEVGWQGYPGFPG-PVGPVG-PPGNNKNRYIG 234
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 644 PWGAWKTPG-PTR-GLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLGE 796
P GA PG P R G PGE G + E P G+PG P P G +GE
Sbjct: 221 PVGAPGAPGGPGRDGEPGENGQDGQQGPEG-PAGADGQPGHPGPDGPSGDVGE 272
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
G+PG+ G E + FPG+P G+PG+P G+ G
Sbjct: 871 GIPGQPGLEGECGEDGFPGSP-GQPGYPGQQGREGEKG 907
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
G+PG+ G E + FPG+P G+PG+P G+ G
Sbjct: 1128 GIPGQPGLEGECGEDGFPGSP-GQPGYPGQQGREGEKG 1164
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
G+PG+ G E + FPG+P G+PG+P G+ G
Sbjct: 1127 GIPGQPGLEGECGEDGFPGSP-GQPGYPGQQGREGEKG 1163
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 31.9 bits (69), Expect = 0.54
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFREKFPGN--PRGEPGFP-PGGNPRGQLG 793
PG T G PG GP N + PGN G+PG P P G+P GQ G
Sbjct: 211 PG-TAGSPGPQGPPGQNGNDGQPGNDGAPGQPGQPGPDGHP-GQPG 254
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 626 GLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFP--PGGNPRGQLG 793
G GS G +G PG GP N + PGN G PG P PG G+ G
Sbjct: 156 GQRGSDGQPGQDAMGGGQGAPGPQGPAGDNGQPGRPGND-GRPGAPGAPGTRSVGRPG 212
>Z68009-4|CAA92006.1| 152|Caenorhabditis elegans Hypothetical
protein R09A8.4 protein.
Length = 152
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 659 KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
K P GLPG GP+ ++ PG+P GEPG P G+ G
Sbjct: 75 KGPSGPPGLPGLVGPKGFSGNSGPPGSP-GEPGPEGEQGPAGKDG 118
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +2
Query: 650 GAWKTPGPT--RGLPGETG-PETWNFREKFPGNPRGEPGFPPGGNPRGQLGE 796
G PGP RG PG G P + P P+G PG P P G G+
Sbjct: 218 GGVGAPGPAGPRGAPGPAGHPGSSGGGRPGPAGPKGAPGQPGRPGPDGHPGQ 269
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 644 PWGAWKTPGPT--RGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
P GA PGP G PG+ G + P P+G PG P GNP GQ G
Sbjct: 157 PAGAPGAPGPQGDAGAPGQAGQGS-GAGAPGPAGPKGAPGAP--GNP-GQAG 204
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 644 PWGAWKTPGPT--RGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
P GA PGP G PG+ G + P P+G PG P GNP GQ G
Sbjct: 157 PAGAPGAPGPQGDAGAPGQAGQGS-GAGAPGPAGPKGAPGAP--GNP-GQAG 204
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 644 PWGAWKTPGPT--RGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
P GA PGP G PG+ G + P P+G PG P GNP GQ G
Sbjct: 157 PAGAPGAPGPQGDAGAPGQAGQGS-GAGAPGPAGPKGAPGAP--GNP-GQAG 204
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 665 PGPTRGLPGETGP---ETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
PGP RG PGE GP N R+ PG P G PG P G G+ G
Sbjct: 150 PGP-RGPPGEVGPAGPSGDNGRKGPPG-PPGGPGGPGEGGDGGRPG 193
>U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protein
172, isoform a protein.
Length = 341
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 626 GLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKFPG--NPRGEPGFPPGGNPRGQLG 793
G G + K P RG PG G + + PG P G PG P P+G+ G
Sbjct: 200 GQTGPPGFPGQKGPNGPRGSPGLQGQDGKKGEQGMPGPQGPTGRPGRPGPKGPKGEDG 257
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 686 PGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
PG+TGP + +K P PRG PG +G+ G
Sbjct: 199 PGQTGPPGFP-GQKGPNGPRGSPGLQGQDGKKGEQG 233
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 581 PGTWFPFGAWFR--IXGGLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEP 754
PG + FGA+ GG+ GS G G G PG G R K PG+ RG P
Sbjct: 532 PGAYGDFGAYGGGGFRGGMRGSPRGGMGGGGGFRGGPPGRGGMANRRGRGKRPGDGRGGP 591
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLGE 796
P GA PGP RGLPG G R+ PG+P GE G G++GE
Sbjct: 176 PPGALGRPGP-RGLPGPRGQNGNPGRDGQPGHP-GEQG---SSGQIGKIGE 221
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Frame = +2
Query: 596 PFGAWFRIXGGLMGSHPWGAWKTPGP---TRGLPGETGPETWNFREKFPGNPRGEPG--- 757
P+ + G GSHP + P P RG P + N P PRG PG
Sbjct: 330 PYNPSAQYPTGKRGSHPGFGPQRPRPGTRPRGNPCDQCSAQPNHCPSGPPGPRGRPGPPG 389
Query: 758 FPPGGNPRGQLG 793
FP PRG G
Sbjct: 390 FPGQDGPRGLRG 401
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLGE 796
P GA PGP RGLPG G R+ PG+P GE G G++GE
Sbjct: 176 PPGALGRPGP-RGLPGPRGQNGNPGRDGQPGHP-GEQG---SSGQIGKIGE 221
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
PGPT G PG+ G +PG GEPG P P+G G
Sbjct: 188 PGPT-GAPGDKGSRG------YPGES-GEPGTPGSAGPKGNAG 222
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = -2
Query: 792 PNWPRGFPPGGK-PGSPRGLPGNFSRKFQXXXXXXXXXXXXXXXVFQAPQGWLPINPPLI 616
P P FPPG PG P G+PG+F+ QG P PP
Sbjct: 292 PGMPGSFPPGAPGPGGP-GMPGSFAP--GAPGPGGPGGYPSGGPGMPGMQGGYPGGPPQQ 348
Query: 615 RNHAPNGNQVPGA 577
R + N +P A
Sbjct: 349 RQQRLDPNMMPSA 361
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 593 FPFGAWFRIXGGLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKF-PGNP-RGEPGFPP 766
FP GA + G+ G+ P G P PG GP F PG P G PG P
Sbjct: 269 FPPGASAPVAPGMPGAFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYP 328
Query: 767 GGNP 778
G P
Sbjct: 329 SGGP 332
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 792 PNWPRGFPPGGKPGSPRGLPGNF 724
P PR FPPG G+PG F
Sbjct: 263 PGMPRAFPPGASAPVAPGMPGAF 285
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 769 PRRETGFPPGIARKLFPEIPGF---RARFPREPAGWPRGFPGP 650
P FPPG + + P +PG P P +P G PGP
Sbjct: 263 PGMPRAFPPGASAPVAPGMPGAFPPGQGGPGMPGSFPPGAPGP 305
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +2
Query: 650 GAWKTPGPTRGLPGETGPETWNFREKFPG-----NPRGEPGFPPGGNPRGQLGE 796
GA PGP+ GLPG+ G + PG P G+ G P P GQ G+
Sbjct: 218 GAPGEPGPS-GLPGDQGQAGRPGSDGAPGPQGPPGPPGQQGHPGQAGPAGQPGQ 270
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPGNPRGEPGFP 763
GLPG GP N PG P G PGFP
Sbjct: 103 GLPGPDGPPGKNGAPGRPGAP-GAPGFP 129
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
PGP G PG +G N PG G+PG P P GQ G
Sbjct: 153 PGPP-GPPGPSGDAGSNGNPGSPGQD-GQPGAPGNKGPSGQNG 193
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFREKFPGNPRGEPGFP-PGGNPRGQLGE 796
PGP+ G PG+ G + + PG R PG P P G P G GE
Sbjct: 200 PGPS-GQPGQDGHPGQDGQPGQPGESREVPGAPGPAGQP-GSQGE 242
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNP 778
P G + PGP G PG P F P G+PPG P
Sbjct: 720 PPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPP 764
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPGNPRGEPGFPPGGNPR 781
G PG +G +PGN G PG PPGG P+
Sbjct: 438 GAPGGSGAPPPGPPGAYPGN--GAPGGPPGGPPQ 469
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +2
Query: 665 PGPTRGLPGETGPE--TWNFREKFPG--NPRGEPGFP-PGGNPRG 784
PGP RG PG GP + PG P G+PG P P G P G
Sbjct: 222 PGP-RGAPGPVGPPGVAEEGPDGLPGPAGPPGKPGMPGPMGTPGG 265
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPG--------NPRGEPGFPPGGNPRGQLGE 796
P G PGP +GLPG G + ++ PG P+G PG P P G+ G+
Sbjct: 160 PPGPAGPPGP-KGLPGPQGDAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPTGEPGK 217
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 751 FPPGIARKLFPEIPGFRARFPREPAGWPRGFPGPPR 644
FPPG R FP PG P P P +PGPPR
Sbjct: 136 FPPGPPRPHFPGPPG-----PHRP---PEHYPGPPR 163
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPGNPR--GEPGFPPGGNPRGQLGE 796
P G P P G P + E N + P P+ G P PP G P+ GE
Sbjct: 68 PKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGE 120
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 8/52 (15%)
Frame = +2
Query: 662 TPGPTRGLPGETGPETWNFREKFPG--------NPRGEPGFPPGGNPRGQLG 793
TPG G PG GP + ++ FPG P G+ GFP GQ G
Sbjct: 232 TPGAP-GAPGNAGPAGPSGQDGFPGQDGAPGSAGPAGQDGFPGNNGSDGQPG 282
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 8/52 (15%)
Frame = +2
Query: 662 TPGPTRGLPGETGPETWNFREKFPG--------NPRGEPGFPPGGNPRGQLG 793
TPG G PG GP + ++ FPG P G+ GFP GQ G
Sbjct: 216 TPGAP-GAPGNAGPAGPSGQDGFPGQDGAPGSAGPAGQDGFPGNNGSDGQPG 266
>Z49967-4|CAA90250.1| 287|Caenorhabditis elegans Hypothetical
protein F54C9.4 protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 677 RGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLGE 796
+G PGETGP+ GEPGFP GQ GE
Sbjct: 145 QGPPGETGPD----------GDIGEPGFPGASGSAGQCGE 174
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 617 IXGGLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPG 757
I GG + P G GP+ GLPG GP N R PG P G PG
Sbjct: 131 IPGGCIKCPP-GCPGPKGPS-GLPGSAGPAGGNGRRGPPG-PVGGPG 174
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 14/57 (24%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFR-----EKFPGNPRGEPG--FPPG-------GNPRGQLG 793
PGP G PGE GP+ R P PRGEPG + PG PRG+ G
Sbjct: 167 PGPVGG-PGEQGPQGDAGRPGAAGRPGPAGPRGEPGTEYKPGQPGRPGPQGPRGETG 222
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETG--PETWNFREKFPGNPRGEPGFPPG--GNPRGQLGE 796
P G PG +G+ G+ G E +R PG P GEPG PPG G+P G LGE
Sbjct: 179 PPGEPGLPG-AQGITGQPGVNAEPVAYRAGAPGPP-GEPG-PPGAHGDP-GDLGE 229
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 659 KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQ 787
+ PGP G PG GP+ P P G PG P GNP Q
Sbjct: 220 EVPGPA-GAPGAPGPDG-------PAGPAGSPGAP--GNPGSQ 252
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 659 KTPGPTRGLPGE-TGPE--TWNFREKFPGNPRGEPGFPPGGNPRGQLGE 796
K P + GLP + +GP P PRGEPG P P G GE
Sbjct: 226 KGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDSGE 274
>U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protein
53 protein.
Length = 160
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFREKFPGNP--RGEPGFPPGGNPRGQLGE 796
P ++G G TG + + G P RG+ GFP P G+ GE
Sbjct: 20 PKGSKGQRGRTGQQGDSAPPSIRGEPGERGDKGFPGVAGPAGEPGE 65
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +2
Query: 650 GAWKTPGP--TRGLPGETGPETWNFREKFPGNPRGEPGFP-PGG--NPRGQLGE 796
GA PGP G PG+ G + + PG+ EPG P P G PRG G+
Sbjct: 188 GAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPGPRGPPGQ 241
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFREKFPGNP--RGEPGFPPGGNPRGQLGE 796
PGP RG PG+ G N + PG P RG G P G G+
Sbjct: 233 PGP-RGPPGQAGSPGGNGQPGGPGQPGQRGSDGQPGNDGQPGAPGQ 277
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 659 KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQ 787
+ PGP G PG GP+ P P G PG P GNP Q
Sbjct: 221 EVPGPA-GAPGAPGPDG-------PAGPAGSPGAP--GNPGSQ 253
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 659 KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQ 787
+ PGP G PG GP+ P P G PG P GNP Q
Sbjct: 283 EVPGPA-GAPGAPGPDG-------PAGPAGSPGAP--GNPGSQ 315
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 659 KTPGPTRGLPGE-TGPE--TWNFREKFPGNPRGEPGFPPGGNPRGQLGE 796
K P + GLP + +GP P PRGEPG P P G GE
Sbjct: 226 KGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDSGE 274
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 617 IXGGLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPG 757
I GG + P G GP+ GLPG GP N R PG P G PG
Sbjct: 137 IPGGCIKCPP-GRPGPKGPS-GLPGSAGPAGGNGRRGPPG-PVGGPG 180
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 14/57 (24%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFR-----EKFPGNPRGEPG--FPPG-------GNPRGQLG 793
PGP G PGE GP+ R P PRGEPG + PG PRG+ G
Sbjct: 173 PGPVGG-PGEQGPQGDAGRPGAAGRPGPAGPRGEPGTEYKPGQPGRPGPQGPRGETG 228
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 659 KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQ 787
+ PGP G PG GP+ P P G PG P GNP Q
Sbjct: 220 EVPGPA-GAPGAPGPDG-------PAGPAGSPGAP--GNPGSQ 252
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 659 KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQ 787
+ PGP G PG GP+ P P G PG P GNP Q
Sbjct: 220 EVPGPA-GAPGAPGPDG-------PAGPAGSPGAP--GNPGSQ 252
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 659 KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQ 787
+ PGP G PG GP+ P P G PG P GNP Q
Sbjct: 221 EVPGPA-GAPGAPGPDG-------PAGPAGSPGAP--GNPGSQ 253
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 659 KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQ 787
+ PGP G PG GP+ P P G PG P GNP Q
Sbjct: 221 EVPGPA-GAPGAPGPDG-------PAGPAGSPGAP--GNPGSQ 253
>CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical
protein C52D10.13 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLGE 796
G PGE G ++ +P GEPG P P+G+ G+
Sbjct: 185 GEPGELGAPGAPGVQRTVASPVGEPGEPGEQGPKGEAGQ 223
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = +2
Query: 680 GLPGETGPETWNFREKFPG-----NPRGEPGFPPGGNPRGQLG 793
G PG GP+ FPG PRG PG P RG+ G
Sbjct: 93 GPPGPAGPKGLRGYPGFPGPIGLDGPRGLPGTPGSKGDRGERG 135
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 650 GAWKTPGPTR--GLPGETGPETWNFREKFPGNPRGEPGFP 763
GA TPG G PG GP+ + PGNP G PG P
Sbjct: 207 GAPGTPGGNALPGPPGPPGPQGPPGADGLPGNP-GAPGVP 245
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +2
Query: 668 GPTRGLPGETGPETWNFREKFPGNPRGE--PGFPPGGNPRGQLG 793
GP G PG+ GP+ N PG P G PG P P+G G
Sbjct: 189 GPP-GPPGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQGPPG 231
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 626 GLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPG--FPPGG 772
G+ GS G+ GP G PG+ GP W R+ G P+G PG PGG
Sbjct: 116 GIRGSK--GSTGDKGPN-GPPGQNGPPGWAGRDGNIG-PQGTPGGRGEPGG 162
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +2
Query: 665 PGPTRGLPGETGP---ETWNFREKFPGNPRGEPGFPPGGN 775
PGP RG PGE GP N R+ PG P G G GG+
Sbjct: 150 PGP-RGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGD 188
>U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen protein
74 protein.
Length = 291
Score = 28.7 bits (61), Expect = 5.1
Identities = 31/84 (36%), Positives = 39/84 (46%)
Frame = +2
Query: 545 LPAIGXEXPE*APGTWFPFGAWFRIXGGLMGSHPWGAWKTPGPTRGLPGETGPETWNFRE 724
L +G P+ PG+ GA GL G P G GPT G PG+ GP+ +
Sbjct: 176 LGPVGPVGPQGEPGSEGEPGADVEHQVGLPG--PKGI---SGPT-GQPGDQGPQGDTGAQ 229
Query: 725 KFPGNPRGEPGFPPGGNPRGQLGE 796
PG P GE G P G+ +G GE
Sbjct: 230 GIPGAP-GERG--PRGD-KGDNGE 249
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFREKFPG--NPRGEPGFPPGGNPRGQLGE 796
PGP G G GP R PG PRG GFP P G+ G+
Sbjct: 151 PGPV-GAIGPMGPIGSMGRAGQPGYSGPRGNDGFPGLPGPPGENGQ 195
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFP----PGG--NPRGQLGE 796
P G PGP G PG+ G + + + F P EP P P G PRG GE
Sbjct: 99 PPGPPGAPGPD-GQPGDAGRQGRSGDDGFDIQPESEPELPCVICPAGPPGPRGAQGE 154
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 648 GGPGKPRGQPAGSRGKRARKP 710
G GK +GQP G +G +KP
Sbjct: 1047 GPKGKSKGQPPGDKGSEVKKP 1067
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -1
Query: 778 GISPRRETGFPPGIARKLFPEIPGFRARFPREPAG--WPRGFPGPP 647
G+ P G P + P +PG P PAG G PGPP
Sbjct: 182 GVGPPGPNGTPGAPGDEGIPGVPGANVICPPGPAGSMGSVGLPGPP 227
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 665 PGPTRGLPGETGPETWNFREKFPGNP--RGEPGFPPGGNPRGQLGE 796
P G PG G + R PG P RGEPG P P G G+
Sbjct: 159 PAGIEGKPGRLGEDN---RPGPPGPPGVRGEPGSPGEKGPTGDRGK 201
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNPRGQLGE 796
P G TPG G PG+ GP K P G+PG P GQ G+
Sbjct: 227 PPGQPGTPGQN-GQPGQPGP-------KGPSGQPGQPGSDGNPGPAGQAGQ 269
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 659 KTPGPTRGLPGETGPETWNFREKFPGNPRGEPGFPPGGNP 778
+ P P G+ P+ R +P P+G PG+P G P
Sbjct: 175 QAPPPVYPPFGQPAPQMSGQRMPYPYPPQGMPGYPGGPPP 214
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 650 GAWKTPGPT--RGLPGETGPE--TWNFREKFPGNPRGEPGFPPGGNPRGQLG 793
G PGP RG PGE G + + G P+G+PG P RG+ G
Sbjct: 169 GRMGPPGPAGVRGPPGELGMRGPQGDPGKVLNGAPQGQPGRPGKVGSRGKAG 220
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 626 GLMGSHPWGAWKTPGPTRGLPGETGPETWNFREKFPG--NPRGEPGFPPGGNPRGQLG 793
G GS GA PG G G G + + ++ PG P G+ GFP GQ G
Sbjct: 210 GQRGSGAPGAPGAPG-NAGPAGPAGQDGFPGQDGAPGPAGPAGQDGFPGNAGSDGQPG 266
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPG--NPRGEPGFPPGGNPRGQLG 793
P G PG GLPG G +PG GEPG+P P G G
Sbjct: 229 PPGPIGAPGMP-GLPGRNGLTGGQGERGWPGVSGESGEPGYPGPEGPMGGQG 279
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPG--NPRGEPGFPPGGNPRGQLG 793
P G PG GLPG G +PG GEPG+P P G G
Sbjct: 266 PPGPIGAPGMP-GLPGRNGLTGGQGERGWPGVSGESGEPGYPGPEGPMGGQG 316
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +2
Query: 644 PWGAWKTPGPTRGLPGETGPETWNFREKFPG--NPRGEPGFPPGGNPRGQLG 793
P G PG GLPG G +PG GEPG+P P G G
Sbjct: 250 PPGPIGAPGMP-GLPGRNGLTGGQGERGWPGVSGESGEPGYPGPEGPMGGQG 300
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 642 TLGGPGKPRGQPAGSRG 692
T GGPG P GQP G+ G
Sbjct: 141 TPGGPGTPGGQPHGTAG 157
>AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform b
protein.
Length = 760
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 725 KFPGNPRGEPGFPPGGNPR 781
++P P G PG PPG PR
Sbjct: 548 RYPLTPPGSPGGPPGKRPR 566
>AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform a
protein.
Length = 833
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 725 KFPGNPRGEPGFPPGGNPR 781
++P P G PG PPG PR
Sbjct: 621 RYPLTPPGSPGGPPGKRPR 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,506,446
Number of Sequences: 27780
Number of extensions: 376234
Number of successful extensions: 1408
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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