Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0259.Seq
(475 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a pr... 122 8e-28
BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for IM... 122 8e-28
BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a ... 122 8e-28
AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a ... 122 8e-28
AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A ... 122 8e-28
BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a ... 119 6e-27
AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a ... 35 0.17
AY358091-1|AAQ88458.1| 126|Homo sapiens VFLL3057 protein. 29 6.2
AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens ... 29 8.2
>U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 122 bits (293), Expect = 8e-28
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +2
Query: 5 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 184
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 185 NKNFCPVLNLDKLWTLVSEQTRLS 256
N++FCP +NLDKLWTLVSEQTR++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVN 89
Score = 36.3 bits (80), Expect = 0.054
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 274 GKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 432
G P+I++V++ PKQPVIV VGGACVL A
Sbjct: 96 GAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for
IMAGE:3543815) protein.
Length = 147
Score = 122 bits (293), Expect = 8e-28
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +2
Query: 5 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 184
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 5 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64
Query: 185 NKNFCPVLNLDKLWTLVSEQTRLS 256
N++FCP +NLDKLWTLVSEQTR++
Sbjct: 65 NQSFCPTVNLDKLWTLVSEQTRVN 88
Score = 36.3 bits (80), Expect = 0.054
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 274 GKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 432
G P+I++V++ PKQPVIV VGGACVL A
Sbjct: 95 GAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 147
>BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 122 bits (293), Expect = 8e-28
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +2
Query: 5 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 184
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 185 NKNFCPVLNLDKLWTLVSEQTRLS 256
N++FCP +NLDKLWTLVSEQTR++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVN 89
Score = 36.3 bits (80), Expect = 0.054
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 274 GKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 432
G P+I++V++ PKQPVIV VGGACVL A
Sbjct: 96 GAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a
protein.
Length = 106
Score = 122 bits (293), Expect = 8e-28
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +2
Query: 5 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 184
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 185 NKNFCPVLNLDKLWTLVSEQTRLS 256
N++FCP +NLDKLWTLVSEQTR++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVN 89
>AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A
protein.
Length = 148
Score = 122 bits (293), Expect = 8e-28
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +2
Query: 5 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 184
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 185 NKNFCPVLNLDKLWTLVSEQTRLS 256
N++FCP +NLDKLWTLVSEQTR++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVN 89
Score = 36.3 bits (80), Expect = 0.054
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 274 GKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 432
G P+I++V++ PKQPVIV VGGACVL A
Sbjct: 96 GAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 119 bits (286), Expect = 6e-27
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 5 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 184
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++++ ++
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYNLKR 65
Query: 185 NKNFCPVLNLDKLWTLVSEQTRLS 256
N++FCP +NLDKLWTLVSEQTR++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVN 89
Score = 33.1 bits (72), Expect = 0.51
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 274 GKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 432
G P+I++V++ KQPVIV VGGACVL A
Sbjct: 96 GAAPIIDVVRSGYYKVLGKGKLAKQPVIVKAKLFSRRAEEKIKSVGGACVLVA 148
>AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a
protein.
Length = 34
Score = 34.7 bits (76), Expect = 0.17
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +2
Query: 206 LNLDKLWTLVSEQTRLS 256
+NLDKLWTLVSEQTR++
Sbjct: 1 VNLDKLWTLVSEQTRVN 17
>AY358091-1|AAQ88458.1| 126|Homo sapiens VFLL3057 protein.
Length = 126
Score = 29.5 bits (63), Expect = 6.2
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2
Query: 159 PSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP---*LT*PLSFLVF 7
P+LPK+PG ++ L W S P P G + + PCP PL FLV+
Sbjct: 55 PALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCPFRVQFEPPLQFLVW 104
>AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens
cDNA FLJ44237 fis, clone THYMU3007845. ).
Length = 139
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/43 (27%), Positives = 15/43 (34%)
Frame = +3
Query: 303 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGCGWCLCTIC 431
+W L Q PQ + L R + C WC C C
Sbjct: 71 AWFLSPVHHSQIPQLAACPLQSLRLSKPRSPGRCCAWCGCLNC 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,824,399
Number of Sequences: 237096
Number of extensions: 1236769
Number of successful extensions: 2800
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2793
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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