Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0259.Seq
         (475 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.     110   1e-24
U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal prot...   110   1e-24
AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p pro...   110   1e-24
AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA...   110   1e-24
X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal prot...   108   4e-24
D10228-1|BAA01080.1|  761|Drosophila melanogaster Ets domain pro...    29   2.4  
EF058032-1|ABL84967.1|  796|Drosophila melanogaster Nup153 protein.    28   7.4  
EF058031-1|ABL84966.1|  796|Drosophila melanogaster Nup153 protein.    28   7.4  
X67704-1|CAA47941.1|  334|Drosophila melanogaster sperm protein ...    27   9.8  
AY060667-1|AAL28215.1|  334|Drosophila melanogaster GH09231p pro...    27   9.8  
AE014297-4221|AAF56779.1|  334|Drosophila melanogaster CG11719-P...    27   9.8  

>U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.
          Length = 149

 Score =  110 bits (264), Expect = 1e-24
 Identities = 49/95 (51%), Positives = 59/95 (62%)
 Frame = +2

Query: 2   KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 181
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 182 KNKNFCPVLNLDKLWTLVSEQTRLSMHLLQMARSP 286
           +   F P +NLDKLW+LV  +    +   +  ++P
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAP 100



 Score = 31.1 bits (67), Expect = 0.80
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = +1

Query: 250 AEYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLS 429
           AE       K PVI++VK            P +PVIV                GG C+LS
Sbjct: 89  AELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLS 148

Query: 430 A 432
           A
Sbjct: 149 A 149


>U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal protein
           RpL27a protein.
          Length = 149

 Score =  110 bits (264), Expect = 1e-24
 Identities = 49/95 (51%), Positives = 59/95 (62%)
 Frame = +2

Query: 2   KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 181
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 182 KNKNFCPVLNLDKLWTLVSEQTRLSMHLLQMARSP 286
           +   F P +NLDKLW+LV  +    +   +  ++P
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAP 100



 Score = 31.1 bits (67), Expect = 0.80
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = +1

Query: 250 AEYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLS 429
           AE       K PVI++VK            P +PVIV                GG C+LS
Sbjct: 89  AELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLS 148

Query: 430 A 432
           A
Sbjct: 149 A 149


>AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p
           protein.
          Length = 149

 Score =  110 bits (264), Expect = 1e-24
 Identities = 49/95 (51%), Positives = 59/95 (62%)
 Frame = +2

Query: 2   KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 181
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 182 KNKNFCPVLNLDKLWTLVSEQTRLSMHLLQMARSP 286
           +   F P +NLDKLW+LV  +    +   +  ++P
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAP 100



 Score = 31.1 bits (67), Expect = 0.80
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = +1

Query: 250 AEYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLS 429
           AE       K PVI++VK            P +PVIV                GG C+LS
Sbjct: 89  AELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLS 148

Query: 430 A 432
           A
Sbjct: 149 A 149


>AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA
           protein.
          Length = 149

 Score =  110 bits (264), Expect = 1e-24
 Identities = 49/95 (51%), Positives = 59/95 (62%)
 Frame = +2

Query: 2   KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 181
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 182 KNKNFCPVLNLDKLWTLVSEQTRLSMHLLQMARSP 286
           +   F P +NLDKLW+LV  +    +   +  ++P
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAP 100



 Score = 31.1 bits (67), Expect = 0.80
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = +1

Query: 250 AEYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLS 429
           AE       K PVI++VK            P +PVIV                GG C+LS
Sbjct: 89  AELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLS 148

Query: 430 A 432
           A
Sbjct: 149 A 149


>X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal protein
           L27a protein.
          Length = 149

 Score =  108 bits (259), Expect = 4e-24
 Identities = 48/95 (50%), Positives = 58/95 (61%)
 Frame = +2

Query: 2   KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 181
           +KKTRKLRGHVS                 N GG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNLGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 182 KNKNFCPVLNLDKLWTLVSEQTRLSMHLLQMARSP 286
           +   F P +NLDKLW+LV  +    +   +  ++P
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAP 100



 Score = 32.3 bits (70), Expect = 0.34
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = +1

Query: 250 AEYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLS 429
           AE       K PVI++VK            P +PVIV              + GG C+LS
Sbjct: 89  AELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKEAGGVCLLS 148

Query: 430 A 432
           A
Sbjct: 149 A 149


>D10228-1|BAA01080.1|  761|Drosophila melanogaster Ets domain
           protein protein.
          Length = 761

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 285 RHQYCQSWILQVARQRQTPQTTCHSKSKVLLKIS 386
           RH  C+   + +A  R+TP  TC S+ + +L+ S
Sbjct: 710 RHSQCRWKAIAMAASRRTPSDTCSSRRRSVLRQS 743


>EF058032-1|ABL84967.1|  796|Drosophila melanogaster Nup153 protein.
          Length = 796

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 95  GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 193
           GG+     +M++YH    G  G+R  H+  N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442


>EF058031-1|ABL84966.1|  796|Drosophila melanogaster Nup153 protein.
          Length = 796

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 95  GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 193
           GG+     +M++YH    G  G+R  H+  N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442


>X67704-1|CAA47941.1|  334|Drosophila melanogaster sperm protein
           protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 105 CSPPALPRPPGCLRCFPIRPCP 40
           CSPP     P C  C+P  P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311


>AY060667-1|AAL28215.1|  334|Drosophila melanogaster GH09231p
           protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 105 CSPPALPRPPGCLRCFPIRPCP 40
           CSPP     P C  C+P  P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311


>AE014297-4221|AAF56779.1|  334|Drosophila melanogaster CG11719-PA
           protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 105 CSPPALPRPPGCLRCFPIRPCP 40
           CSPP     P C  C+P  P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,739,916
Number of Sequences: 53049
Number of extensions: 386888
Number of successful extensions: 1532
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)