Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0258.Seq
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 34 0.14
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 34 0.14
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 29 5.4
Z48795-3|CAA88727.1| 414|Caenorhabditis elegans Hypothetical pr... 28 7.1
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 7.1
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 28 7.1
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 7.1
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 7.1
Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical pr... 28 9.4
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 28 9.4
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 9.4
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 9.4
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 9.4
AC024202-8|AAK93869.2| 816|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 349 ESQSLEVVRQSSHSKDALREVFDTDSSSAQDETVPAQDQRANRNAIRLEPPPS 507
+S S+ + ++S + D +SSS E +P +++R R A+ L PPP+
Sbjct: 70 DSPSVNSLTRNSSLTMLAKAALDYESSSCALEYIPKEERRPPRRALALSPPPA 122
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 349 ESQSLEVVRQSSHSKDALREVFDTDSSSAQDETVPAQDQRANRNAIRLEPPPS 507
+S S+ + ++S + D +SSS E +P +++R R A+ L PPP+
Sbjct: 70 DSPSVNSLTRNSSLTMLAKAALDYESSSCALEYIPKEERRPPRRALALSPPPA 122
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 418 TDSSSAQDETVPAQDQRANRNAIRLEPPPSTA 513
T S Q +T P DQ N + PPPS+A
Sbjct: 295 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSA 326
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 418 TDSSSAQDETVPAQDQRANRNAIRLEPPPSTA 513
T S Q +T P DQ N + PPPS+A
Sbjct: 363 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSA 394
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 418 TDSSSAQDETVPAQDQRANRNAIRLEPPPSTA 513
T S Q +T P DQ N + PPPS+A
Sbjct: 295 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSA 326
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 418 TDSSSAQDETVPAQDQRANRNAIRLEPPPSTA 513
T S Q +T P DQ N + PPPS+A
Sbjct: 363 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSA 394
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 299 GIRDESQAPVSHSPPYKRVRALRLFDSPHTPKTLLEKCSTPTHHPPRT 442
G+R + P H P ++ R++RL +P L TP H P RT
Sbjct: 53 GVRLAPKKPHQHRPR-RQFRSVRLPRTPSRNSPLTPPTKTPPHTPTRT 99
>Z48795-3|CAA88727.1| 414|Caenorhabditis elegans Hypothetical
protein R05H5.4 protein.
Length = 414
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 406 EVFDTDSSSAQDETVPAQDQRANRNAIRLEPPPS 507
E F+T S E AQ +R R RL PPPS
Sbjct: 308 EFFETPFKSPYVEMKAAQVKRKTRAGYRLPPPPS 341
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 358 SLEVVRQSSHSKDAL---REVFDTDSSSAQDETVPAQDQRANRNAIRLEPPPSTAIW*RR 528
S+E + S K AL R + D D+S+ D V + QRA+R I++E S
Sbjct: 99 SIEDWKHSPAFKRALAVPRLLSDADASALHDYFVRVEMQRADREIIKMEAELSRL---AE 155
Query: 529 QRARQSTPRTNW 564
Q AR++ +W
Sbjct: 156 QEARETGEAISW 167
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 358 SLEVVRQSSHSKDAL---REVFDTDSSSAQDETVPAQDQRANRNAIRLEPPPSTAIW*RR 528
S+E + S K AL R + D D+S+ D V + QRA+R I++E S
Sbjct: 297 SIEDWKHSPAFKRALAVPRLLSDADASALHDYFVRVEMQRADREIIKMEAELSRL---AE 353
Query: 529 QRARQSTPRTNW 564
Q AR++ +W
Sbjct: 354 QEARETGEAISW 365
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 442 ETVPAQDQRANRNAIRLEPPPSTAIW*RRQRARQSTPR 555
+T PA ++ + PPP +W +R+ R+S R
Sbjct: 399 DTPPASEKTTPAEEVLPAPPPQENVWAKRKEERESLER 436
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 358 SLEVVRQSSHSKDAL---REVFDTDSSSAQDETVPAQDQRANRNAIRLEPPPSTAIW*RR 528
S+E + S K AL R + D D+S+ D V + QRA+R I++E S
Sbjct: 99 SIEDWKHSPAFKRALAVPRLLSDADASALHDYFVRVEMQRADREIIKMEAELSRL---AE 155
Query: 529 QRARQSTPRTNW 564
Q AR++ +W
Sbjct: 156 QEARETGEAISW 167
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 358 SLEVVRQSSHSKDAL---REVFDTDSSSAQDETVPAQDQRANRNAIRLEPPPSTAIW*RR 528
S+E + S K AL R + D D+S+ D V + QRA+R I++E S
Sbjct: 297 SIEDWKHSPAFKRALAVPRLLSDADASALHDYFVRVEMQRADREIIKMEAELSRL---AE 353
Query: 529 QRARQSTPRTNW 564
Q AR++ +W
Sbjct: 354 QEARETGEAISW 365
>Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical
protein C08E8.1 protein.
Length = 102
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 207 PTCHKMSRQTIQTNCAYCLVLFSFCTTQSCPFPHI 103
PTC K ++ T+ C L F T C FP +
Sbjct: 37 PTCEKAYMTSVNTHIGVCWWLICFFGTVLCCFPFL 71
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 358 SLEVVRQSSHSKDALREVFDTDSSSAQD---ETVPAQDQRANRNAIRLEPPPSTA 513
SLEV H DA RE FDT SS + ET +R++ + E PS A
Sbjct: 128 SLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMDLSPTSRDSTQFEQIPSIA 182
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 358 SLEVVRQSSHSKDALREVFDTDSSSAQD---ETVPAQDQRANRNAIRLEPPPSTA 513
SLEV H DA RE FDT SS + ET +R++ + E PS A
Sbjct: 128 SLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMDLSPTSRDSTQFEQIPSIA 182
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 358 SLEVVRQSSHSKDALREVFDTDSSSAQD---ETVPAQDQRANRNAIRLEPPPSTA 513
SLEV H DA RE FDT SS + ET +R++ + E PS A
Sbjct: 128 SLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMDLSPTSRDSTQFEQIPSIA 182
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 358 SLEVVRQSSHSKDALREVFDTDSSSAQD---ETVPAQDQRANRNAIRLEPPPSTA 513
SLEV H DA RE FDT SS + ET +R++ + E PS A
Sbjct: 128 SLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMDLSPTSRDSTQFEQIPSIA 182
>AC024202-8|AAK93869.2| 816|Caenorhabditis elegans Hypothetical
protein Y71H2B.5 protein.
Length = 816
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 471 KQECHQARATTFHRHLVTTTARSAVYPPDELDE 569
+Q C++AR+T+F +T SA Y P L E
Sbjct: 602 QQRCNKARSTSFELGAITVDPGSAEYNPRPLIE 634
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,251,390
Number of Sequences: 27780
Number of extensions: 465728
Number of successful extensions: 1336
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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