Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0258.Seq
         (828 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   0.85 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.0  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   8.0  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 242 DTSVLVPRKLDFSNLDDDDG 301
           +  ++ P+K D SN+  DDG
Sbjct: 426 ENMIIPPKKSDMSNMQSDDG 445


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 181 DNSDELCLLFSPVFILYHSVMS 116
           D + + CL ++  FI+Y S+ S
Sbjct: 330 DRTPDQCLFYNTDFIIYSSLSS 351


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 582 VRRPICQHPXLFR-PDWSSG*NKKENVALXPRNSGPWGRARPRSKPG 719
           + +P   HP L R P+   G N+   +   PR   P  R  P ++PG
Sbjct: 106 IPQPRPPHPRLRREPEAEPGNNRPVYIP-QPRPPHPRLRREPEAEPG 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,018
Number of Sequences: 438
Number of extensions: 6283
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)