Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0257.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    26   0.34 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   3.2  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   4.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.7  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = -2

Query: 616 RSMMLTSDTDIKSNFIPGGDEIFILLAV----AFVDVLAMSNV 500
           R+  +T  +D+K  F PGG  + + +A     A  DV AMSNV
Sbjct: 150 RANFITLLSDLKEAFRPGGYLLTVAVAAIPTDAAYDVPAMSNV 192


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 564 PGMKLLLISVSLVNIMDLRWNALAAIS 644
           P   L L S   ++ +DL WN+++++S
Sbjct: 359 PLTSLSLASAQTLSELDLSWNSISSLS 385


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 558  SPPGMKLLLISVSLVNIMDLRW 623
            S P M LLLI  S++N+  + W
Sbjct: 1038 SIPSMYLLLILYSIINLNVVSW 1059


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 558  SPPGMKLLLISVSLVNIMDLRW 623
            S P M LLLI  S++N+  + W
Sbjct: 1038 SIPSMYLLLILYSIINLNVVSW 1059


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 558  SPPGMKLLLISVSLVNIMDLRW 623
            S P M LLLI  S++N+  + W
Sbjct: 1038 SIPSMYLLLILYSIINLNVVSW 1059


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 558  SPPGMKLLLISVSLVNIMDLRW 623
            S P M LLLI  S++N+  + W
Sbjct: 1038 SIPSMYLLLILYSIINLNVVSW 1059


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 200 HSSGQLSQGLPSDTSFI 150
           H  GQL  GLP+ TS I
Sbjct: 241 HHQGQLVVGLPAPTSSI 257


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +2

Query: 605 HHGS-PLECIGCNKFDSESGSI 667
           H G  P  CI CNK  S++ ++
Sbjct: 16  HSGEKPYRCIDCNKSFSQAANL 37


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +2

Query: 605 HHGS-PLECIGCNKFDSESGSI 667
           H G  P  CI CNK  S++ ++
Sbjct: 272 HSGEKPYRCIDCNKSFSQAANL 293


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +1

Query: 241 SCG---CDD*SIRCTMKNWARFETDSDSATLES 330
           SCG   C D  + C  K   + E+D +S T+E+
Sbjct: 115 SCGNGECIDKELFCNGKPDCKDESDENSCTVET 147


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +1

Query: 241 SCG---CDD*SIRCTMKNWARFETDSDSATLES 330
           SCG   C D  + C  K   + E+D +S T+E+
Sbjct: 122 SCGNGECIDKELFCNGKPDCKDESDENSCTVET 154


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = +3

Query: 282 ELGSVRDRLGLRDSRVNHHSYDSPPGLTAKQTELYWQSLAERTPTS 419
           E  S+ +R   R   +       PPG+    T        E++PTS
Sbjct: 809 ESSSISERCSSRVESLTPERKMEPPGVPLNSTPRSTPDKREKSPTS 854


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 564  PGMKLLLISVSLVNIMDLRW 623
            P M LLL+  S+ N+ ++ W
Sbjct: 1013 PSMYLLLVIYSVFNMNNVSW 1032


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 564  PGMKLLLISVSLVNIMDLRW 623
            P M LLL+  S+ N+ ++ W
Sbjct: 1013 PSMYLLLVIYSVFNMNNVSW 1032


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 467 PSTPSTPRRLTSGATCTSRSTLS 399
           PS+  T R  TS  T +SRS ++
Sbjct: 81  PSSLPTQRTSTSNPTYSSRSVMT 103


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 236 QVFLQACETNPGHSSGQLSQ 177
           Q   Q C+ N GH    LSQ
Sbjct: 200 QYIKQVCKLNNGHYKNFLSQ 219


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 236 QVFLQACETNPGHSSGQLSQ 177
           Q   Q C+ N GH    LSQ
Sbjct: 25  QYIKQVCKLNNGHYKNFLSQ 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,663
Number of Sequences: 336
Number of extensions: 3484
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)