Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0257.Seq
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein. 51 5e-06
BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein. 51 5e-06
BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein. 51 5e-06
BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein. 51 5e-06
AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain prote... 51 5e-06
BC001451-1|AAH01451.1| 421|Homo sapiens testis derived transcri... 44 7e-04
AK021575-1|BAB13846.1| 421|Homo sapiens protein ( Homo sapiens ... 44 7e-04
AJ250865-1|CAB65119.1| 421|Homo sapiens TESS 2 protein. 44 7e-04
AF260225-2|AAG17636.1| 412|Homo sapiens TESTIN 3 protein. 44 7e-04
AF260225-1|AAG17635.1| 421|Homo sapiens TESTIN 2 protein. 44 7e-04
AF245357-1|AAG17613.1| 412|Homo sapiens TESTIN 3 protein. 44 7e-04
AF245356-1|AAG17612.1| 421|Homo sapiens TESTIN 2 protein. 44 7e-04
AC073130-1|AAQ93367.1| 421|Homo sapiens unknown protein. 44 7e-04
BC000646-1|AAH00646.1| 365|Homo sapiens LIM and cysteine-rich d... 42 0.003
AK022176-1|BAB13976.1| 365|Homo sapiens protein ( Homo sapiens ... 42 0.003
AF216709-1|AAG36778.1| 365|Homo sapiens dyxin protein. 42 0.003
AF169284-1|AAF34411.1| 365|Homo sapiens LIM and cysteine-rich d... 42 0.003
AK222840-1|BAD96560.1| 421|Homo sapiens testin isoform 1 varian... 38 0.026
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 32 2.3
AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 32 2.3
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 32 2.3
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 32 2.3
AB023146-1|BAA76773.1| 1663|Homo sapiens KIAA0929 protein protein. 32 2.3
>CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein.
Length = 615
Score = 50.8 bits (116), Expect = 5e-06
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 154 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGC 252
++ G+PC++C E CPGF+ H WRK C+ C C
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKC 51
>BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 50.8 bits (116), Expect = 5e-06
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 154 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGC 252
++ G+PC++C E CPGF+ H WRK C+ C C
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKC 51
>BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 50.8 bits (116), Expect = 5e-06
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 154 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGC 252
++ G+PC++C E CPGF+ H WRK C+ C C
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKC 51
>BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 50.8 bits (116), Expect = 5e-06
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 154 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGC 252
++ G+PC++C E CPGF+ H WRK C+ C C
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKC 51
>AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain protein
protein.
Length = 615
Score = 50.8 bits (116), Expect = 5e-06
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 154 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGC 252
++ G+PC++C E CPGF+ H WRK C+ C C
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKC 51
>BC001451-1|AAH01451.1| 421|Homo sapiens testis derived transcript
(3 LIM domains) protein.
Length = 421
Score = 43.6 bits (98), Expect = 7e-04
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
G PC C E C GF H WRK C++C C
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKC 46
>AK021575-1|BAB13846.1| 421|Homo sapiens protein ( Homo sapiens
cDNA FLJ11513 fis, clone HEMBA1002215, highly similar to
TESTIN 2 (TES2) [CONTAINS: TESTIN 1 (TES1)]. ).
Length = 421
Score = 43.6 bits (98), Expect = 7e-04
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
G PC C E C GF H WRK C++C C
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKC 46
>AJ250865-1|CAB65119.1| 421|Homo sapiens TESS 2 protein.
Length = 421
Score = 43.6 bits (98), Expect = 7e-04
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
G PC C E C GF H WRK C++C C
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKC 46
>AF260225-2|AAG17636.1| 412|Homo sapiens TESTIN 3 protein.
Length = 412
Score = 43.6 bits (98), Expect = 7e-04
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
G PC C E C GF H WRK C++C C
Sbjct: 10 GAPCLKCKEKCEGFELHFWRKICRNCKC 37
>AF260225-1|AAG17635.1| 421|Homo sapiens TESTIN 2 protein.
Length = 421
Score = 43.6 bits (98), Expect = 7e-04
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
G PC C E C GF H WRK C++C C
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKC 46
>AF245357-1|AAG17613.1| 412|Homo sapiens TESTIN 3 protein.
Length = 412
Score = 43.6 bits (98), Expect = 7e-04
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
G PC C E C GF H WRK C++C C
Sbjct: 10 GAPCLKCKEKCEGFELHFWRKICRNCKC 37
>AF245356-1|AAG17612.1| 421|Homo sapiens TESTIN 2 protein.
Length = 421
Score = 43.6 bits (98), Expect = 7e-04
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
G PC C E C GF H WRK C++C C
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKC 46
>AC073130-1|AAQ93367.1| 421|Homo sapiens unknown protein.
Length = 421
Score = 43.6 bits (98), Expect = 7e-04
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
G PC C E C GF H WRK C++C C
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKC 46
>BC000646-1|AAH00646.1| 365|Homo sapiens LIM and cysteine-rich
domains 1 protein.
Length = 365
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 163 SEGRPCDNCPELCPGFVSHAWRKTCKSCGC 252
+ G C C C GF H+WRK CKSC C
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKC 52
>AK022176-1|BAB13976.1| 365|Homo sapiens protein ( Homo sapiens
cDNA FLJ12114 fis, clone MAMMA1000055, weakly similar to
TESTIN 2 (TES2) [CONTAINS: TESTIN 1 (TES1)]. ).
Length = 365
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 163 SEGRPCDNCPELCPGFVSHAWRKTCKSCGC 252
+ G C C C GF H+WRK CKSC C
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKC 52
>AF216709-1|AAG36778.1| 365|Homo sapiens dyxin protein.
Length = 365
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 163 SEGRPCDNCPELCPGFVSHAWRKTCKSCGC 252
+ G C C C GF H+WRK CKSC C
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKC 52
>AF169284-1|AAF34411.1| 365|Homo sapiens LIM and cysteine-rich
domains protein 1 protein.
Length = 365
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 163 SEGRPCDNCPELCPGFVSHAWRKTCKSCGC 252
+ G C C C GF H+WRK CKSC C
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKC 52
>AK222840-1|BAD96560.1| 421|Homo sapiens testin isoform 1 variant
protein.
Length = 421
Score = 38.3 bits (85), Expect = 0.026
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
G PC C E C GF H RK C++C C
Sbjct: 19 GAPCLKCKEKCEGFELHFCRKICRNCKC 46
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 155 KKYQREDLATTVQSCAPDSSHTLGERPASHAGVTIEAFGVP*RTGLGSRPTRTP 316
K+ + + V+S P+S+ GE PA++ G T++ P +P TP
Sbjct: 2341 KRNTNKKVVAPVESHVPESNQAQGESPAANEGTTVQHPEAPQEEKQSEKPHSTP 2394
>AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein
protein.
Length = 3261
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 155 KKYQREDLATTVQSCAPDSSHTLGERPASHAGVTIEAFGVP*RTGLGSRPTRTP 316
K+ + + V+S P+S+ GE PA++ G T++ P +P TP
Sbjct: 1938 KRNTNKKVVAPVESHVPESNQAQGESPAANEGTTVQHPEAPQEEKQSEKPHSTP 1991
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 155 KKYQREDLATTVQSCAPDSSHTLGERPASHAGVTIEAFGVP*RTGLGSRPTRTP 316
K+ + + V+S P+S+ GE PA++ G T++ P +P TP
Sbjct: 2341 KRNTNKKVVAPVESHVPESNQAQGESPAANEGTTVQHPEAPQEEKQSEKPHSTP 2394
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 155 KKYQREDLATTVQSCAPDSSHTLGERPASHAGVTIEAFGVP*RTGLGSRPTRTP 316
K+ + + V+S P+S+ GE PA++ G T++ P +P TP
Sbjct: 2341 KRNTNKKVVAPVESHVPESNQAQGESPAANEGTTVQHPEAPQEEKQSEKPHSTP 2394
>AB023146-1|BAA76773.1| 1663|Homo sapiens KIAA0929 protein protein.
Length = 1663
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 155 KKYQREDLATTVQSCAPDSSHTLGERPASHAGVTIEAFGVP*RTGLGSRPTRTP 316
K+ + + V+S P+S+ GE PA++ G T++ P +P TP
Sbjct: 340 KRNTNKKVVAPVESHVPESNQAQGESPAANEGTTVQHPEAPQEEKQSEKPHSTP 393
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,965,305
Number of Sequences: 237096
Number of extensions: 2343337
Number of successful extensions: 6267
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6266
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -