Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0257.Seq
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical p... 50 2e-06
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 50 2e-06
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 41 0.001
Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical p... 32 0.45
Z35663-3|CAA84723.1| 480|Caenorhabditis elegans Hypothetical pr... 32 0.45
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 32 0.45
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 32 0.45
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 32 0.45
AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin monoox... 32 0.45
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 32 0.45
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 1.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.4
Z70681-3|CAA94579.2| 403|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 7.4
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 7.4
U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated p... 28 7.4
M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein. 28 7.4
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 7.4
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 7.4
U64848-5|AAB04884.1| 330|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 27 9.8
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 207 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 253
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 244 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 290
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 145 VRIKEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCD 255
+ + +V +G C + E G+ H WRK C C D
Sbjct: 115 MNLTDVEDGARCRD-KECHLGWKQHPWRKVCVHCKSD 150
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 244 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 290
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 145 VRIKEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCD 255
+ + +V +G C + E G+ H WRK C C D
Sbjct: 115 MNLTDVEDGARCRD-KECHLGWKQHPWRKVCVHCKSD 150
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 152 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 198
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 145 VRIKEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCD 255
+ + +V +G C + E G+ H WRK C C D
Sbjct: 23 MNLTDVEDGARCRD-KECHLGWKQHPWRKVCVHCKSD 58
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 207 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 253
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 244 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 290
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 145 VRIKEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCD 255
+ + +V +G C + E G+ H WRK C C D
Sbjct: 115 MNLTDVEDGARCRD-KECHLGWKQHPWRKVCVHCKSD 150
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 244 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 290
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 145 VRIKEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCD 255
+ + +V +G C + E G+ H WRK C C D
Sbjct: 115 MNLTDVEDGARCRD-KECHLGWKQHPWRKVCVHCKSD 150
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 152 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 198
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 145 VRIKEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCD 255
+ + +V +G C + E G+ H WRK C C D
Sbjct: 23 MNLTDVEDGARCRD-KECHLGWKQHPWRKVCVHCKSD 58
>Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical
protein F25H5.1e protein.
Length = 454
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 74 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 120
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 IGHCKHI-DEGHRKQYEDFVAARNEIALDIGIASQHHGSPLECIGCN 640
+ +C+H+ + RK YE+FV ARNEIALDIG S + +EC C+
Sbjct: 244 VAYCRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCS 290
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 145 VRIKEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCD 255
+ + +V +G C + E G+ H WRK C C D
Sbjct: 115 MNLTDVEDGARCRD-KECHLGWKQHPWRKVCVHCKSD 150
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 157 EVSEGRPCDNCPEL-CPGFVSHAWRKTCKSCGC 252
++ +G C N P C G H WRK CK+CGC
Sbjct: 35 DIGQGSQCRNLPTCRCEGLDLHFWRKMCKNCGC 67
>Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical
protein F53F4.5 protein.
Length = 568
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/50 (28%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -1
Query: 356 GRTVIGVMVD-SRVAESESVSNRAQFFMVHRMLQSSHPHDLQVFLQACET 210
G + + + VD +++A+S ++S R ++ +R+ Q P+D+Q+F + +T
Sbjct: 182 GNSALDIAVDIAKIAKSVTISTRRGTWIFNRVSQGGMPYDVQLFSRYYDT 231
>Z35663-3|CAA84723.1| 480|Caenorhabditis elegans Hypothetical
protein T04A8.5 protein.
Length = 480
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 113 EGRKVHFLRRVCG*KKYQREDLATTVQSCAPDSSHTLGERPASHAGVTIE 262
EG++V +R CG +DL + PDSS + AS +G+T E
Sbjct: 277 EGQQVQTVREECGKTMALEDDLEADIVGNVPDSSLSAAIGYASQSGITYE 326
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 31.9 bits (69), Expect = 0.45
Identities = 26/84 (30%), Positives = 36/84 (42%)
Frame = -3
Query: 312 VRVGLEPSPVLHGTPNASIVTPA*LAGLSPSV*DESGAQLWTVVARSSL*YFFYPHTRLR 133
V+V L P HG ASI+ P +G P D+S A TV R SL F ++ R
Sbjct: 1613 VQVVLCDQPTKHGLVPASIIAPP-ESGSVPDRPDDSNASGSTVSKRKSLRRIFANSSKER 1671
Query: 132 KCTFRPSGWSSIHPVSRDQQSNKT 61
S ++ P +R S +
Sbjct: 1672 AAAANSSSSNNNSPATRQSTSTSS 1695
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 31.9 bits (69), Expect = 0.45
Identities = 26/84 (30%), Positives = 36/84 (42%)
Frame = -3
Query: 312 VRVGLEPSPVLHGTPNASIVTPA*LAGLSPSV*DESGAQLWTVVARSSL*YFFYPHTRLR 133
V+V L P HG ASI+ P +G P D+S A TV R SL F ++ R
Sbjct: 53 VQVVLCDQPTKHGLVPASIIAPP-ESGSVPDRPDDSNASGSTVSKRKSLRRIFANSSKER 111
Query: 132 KCTFRPSGWSSIHPVSRDQQSNKT 61
S ++ P +R S +
Sbjct: 112 AAAANSSSSNNNSPATRQSTSTSS 135
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 31.9 bits (69), Expect = 0.45
Identities = 26/84 (30%), Positives = 36/84 (42%)
Frame = -3
Query: 312 VRVGLEPSPVLHGTPNASIVTPA*LAGLSPSV*DESGAQLWTVVARSSL*YFFYPHTRLR 133
V+V L P HG ASI+ P +G P D+S A TV R SL F ++ R
Sbjct: 1613 VQVVLCDQPTKHGLVPASIIAPP-ESGSVPDRPDDSNASGSTVSKRKSLRRIFANSSKER 1671
Query: 132 KCTFRPSGWSSIHPVSRDQQSNKT 61
S ++ P +R S +
Sbjct: 1672 AAAANSSSSNNNSPATRQSTSTSS 1695
>AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 568
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/50 (28%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -1
Query: 356 GRTVIGVMVD-SRVAESESVSNRAQFFMVHRMLQSSHPHDLQVFLQACET 210
G + + + VD +++A+S ++S R ++ +R+ Q P+D+Q+F + +T
Sbjct: 182 GNSALDIAVDIAKIAKSVTISTRRGTWIFNRVSQGGMPYDVQLFSRYYDT 231
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 31.9 bits (69), Expect = 0.45
Identities = 26/84 (30%), Positives = 36/84 (42%)
Frame = -3
Query: 312 VRVGLEPSPVLHGTPNASIVTPA*LAGLSPSV*DESGAQLWTVVARSSL*YFFYPHTRLR 133
V+V L P HG ASI+ P +G P D+S A TV R SL F ++ R
Sbjct: 1613 VQVVLCDQPTKHGLVPASIIAPP-ESGSVPDRPDDSNASGSTVSKRKSLRRIFANSSKER 1671
Query: 132 KCTFRPSGWSSIHPVSRDQQSNKT 61
S ++ P +R S +
Sbjct: 1672 AAAANSSSSNNNSPATRQSTSTSS 1695
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 7/38 (18%)
Frame = +1
Query: 181 DNCPELCPGFVSHAWRK-------TCKSCGCDD*SIRC 273
D C CPGFV W+ TC++C C S C
Sbjct: 329 DMCERCCPGFVQKQWQAATAHNNFTCEACNCFGRSNEC 366
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 7/38 (18%)
Frame = +1
Query: 181 DNCPELCPGFVSHAWRK-------TCKSCGCDD*SIRC 273
D C CPGFV W+ TC++C C S C
Sbjct: 329 DMCERCCPGFVQKQWQAATAHNNFTCEACNCFGRSNEC 366
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 7/38 (18%)
Frame = +1
Query: 181 DNCPELCPGFVSHAWRK-------TCKSCGCDD*SIRC 273
D C CPGFV W+ TC++C C S C
Sbjct: 329 DMCERCCPGFVQKQWQAATAHNNFTCEACNCFGRSNEC 366
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 7/38 (18%)
Frame = +1
Query: 181 DNCPELCPGFVSHAWRK-------TCKSCGCDD*SIRC 273
D C CPGFV W+ TC++C C S C
Sbjct: 329 DMCERCCPGFVQKQWQAATAHNNFTCEACNCFGRSNEC 366
>Z70681-3|CAA94579.2| 403|Caenorhabditis elegans Hypothetical
protein C30F2.3 protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 123 FRPSGWSSIHPVSRDQQSNKTTDQSDAT 40
F P+G SS +PV RDQ SN T T
Sbjct: 174 FAPAGSSSSNPVLRDQNSNIYTSTMSPT 201
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +1
Query: 118 PKGAFSETGVRIKEVS---EGRPCDNCPE--LCPGFVSHAWRKTCKSCGCD 255
P+G + E G R E + EG C+ C + P +SH C++C CD
Sbjct: 377 PEGVY-EGGGRCLECAHNTEGFNCERCKDGYYRPSGLSHYREDACRTCECD 426
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 SETGVRIKEVSE--GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
SETG +K + G C++C E G +A TCK CGC
Sbjct: 905 SETGKCLKCIGHTTGDSCESCKEHHWG---NAQLHTCKPCGC 943
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 458 PSTPRRLTSGAT-CTSRSTLSERLPVQLG--LLSGESGRTVIGVMVDSRVAESES 303
PST LTSG T TSR++ + P G SG + T G + + + S+S
Sbjct: 336 PSTTSALTSGGTSTTSRASSASDDPTTTGPSTTSGSTASTTSGSLFSTSLGSSQS 390
>U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated
protein 6 protein.
Length = 612
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHA-----WRKTCKSCGC 252
GR C C PGFV RK CKSCGC
Sbjct: 383 GRNCHLCK---PGFVRDTSLPMTHRKACKSCGC 412
>M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein.
Length = 612
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Frame = +1
Query: 169 GRPCDNCPELCPGFVSHA-----WRKTCKSCGC 252
GR C C PGFV RK CKSCGC
Sbjct: 383 GRNCHLCK---PGFVRDTSLPMTHRKACKSCGC 412
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +1
Query: 118 PKGAFSETGVRIKEVS---EGRPCDNCPE--LCPGFVSHAWRKTCKSCGCD 255
P+G + E G R E + EG C+ C + P +SH C++C CD
Sbjct: 377 PEGVY-EGGGRCLECAHNTEGFNCERCKDGYYRPSGLSHYREDACRTCECD 426
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 SETGVRIKEVSE--GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
SETG +K + G C++C E G +A TCK CGC
Sbjct: 905 SETGKCLKCIGHTTGDSCESCKEHHWG---NAQLHTCKPCGC 943
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +1
Query: 118 PKGAFSETGVRIKEVS---EGRPCDNCPE--LCPGFVSHAWRKTCKSCGCD 255
P+G + E G R E + EG C+ C + P +SH C++C CD
Sbjct: 377 PEGVY-EGGGRCLECAHNTEGFNCERCKDGYYRPSGLSHYREDACRTCECD 426
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 SETGVRIKEVSE--GRPCDNCPELCPGFVSHAWRKTCKSCGC 252
SETG +K + G C++C E G +A TCK CGC
Sbjct: 905 SETGKCLKCIGHTTGDSCESCKEHHWG---NAQLHTCKPCGC 943
>U64848-5|AAB04884.1| 330|Caenorhabditis elegans Hypothetical
protein C50E3.9 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 125 PFGLLVGVPFILSPVINNQTKRPTNRMPQNFFTDTC 18
PF LL+ ++LS V ++ + N+MPQ F + C
Sbjct: 37 PFFLLISKMYVLSLVFSSSIQNMANQMPQ--FEEIC 70
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 244 CGCDD*SIRCTMKNWARFETD 306
CGC+D CT+++W ET+
Sbjct: 722 CGCEDFGWNCTLEDWKWNETN 742
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,636,032
Number of Sequences: 27780
Number of extensions: 359671
Number of successful extensions: 1105
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -