Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0256.Seq
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 40 0.002
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 37 0.011
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116... 34 0.099
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 32 0.40
03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583... 31 0.53
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 31 0.53
09_04_0560 - 18519024-18519145,18519330-18519435,18519671-185199... 31 0.92
11_02_0149 - 8801675-8804332 30 1.2
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 29 2.1
02_05_1331 + 35736543-35736638,35737407-35737525,35737670-357377... 29 2.8
01_01_0862 + 6714041-6714358,6714462-6714603,6715511-6715735,671... 29 2.8
12_01_0084 - 678324-679643 28 4.9
11_01_0083 - 629885-631189 28 4.9
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 28 4.9
>05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
Frame = -1
Query: 487 DFHELEKSTEYDGAYASDSXMLQXFWGIVXQLXXXXXXXXASVHDRV--GPGARGRAVQL 314
D +L +T Y G Y D ++ FW ++ GP + ++
Sbjct: 913 DIDDLRSNTNYSGGYHPDHELIDIFWEVLKSFSSHNQKKFLKFVTGCSRGPLLGFQYLEP 972
Query: 313 ELC-DREXRPGLRPASH-----RAHFFNVLLLPEYDTRDKLQDRLLKAINYSKGFGL 161
+ C R PG+ A N+L LP Y + +L+ +LL AIN GF L
Sbjct: 973 KFCIQRAGVPGMEEEDEDRLPTSATCMNLLKLPPYRNKTQLESKLLYAINAEAGFDL 1029
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 37.1 bits (82), Expect = 0.011
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Frame = -1
Query: 487 DFHELEKSTEYDGAYASDSXMLQXFWGIVXQLXXXXXXXXASVHDRVG--PGARGRAVQ- 317
DF +L+ + EY G Y+ S ++ FW +V P +A+Q
Sbjct: 3522 DFDDLKANAEYIG-YSPASPVILWFWEVVNGFSKEDMARFLQFVTGTSKVPLEGFKALQG 3580
Query: 316 ------LELCDREXRPGLRPASHRAHFFNVLLLPEYDTRDKLQDRLLKAIN-YSKGFG 164
++ P P++H FN L LPEY ++++L++RLL AI+ S+GFG
Sbjct: 3581 ISGPQRFQIHKAYGAPERLPSAHTC--FNQLDLPEYSSKEQLEERLLLAIHEASEGFG 3636
>05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,
1164082-1164240,1164663-1164797,1165116-1165268,
1165358-1165479,1165599-1166541,1166677-1166728,
1166873-1167963,1168058-1168384,1168479-1168559,
1168649-1168717,1168809-1168937,1169038-1169121,
1169210-1169275
Length = 1321
Score = 33.9 bits (74), Expect = 0.099
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 384 EXKRKLLQFTTGSDRVPVGGLCNLNFVIAXNGPDCDXLPTAHTSSMSYC 238
E +R L FTTG+ ++P+GGL +L+ + CD S++ C
Sbjct: 1240 EDQRAFLHFTTGAPQLPLGGLASLDPKLTVVRKQCDGKVDNELPSVNTC 1288
>05_05_0136 - 22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2
Query: 378 KRKLLQFTTGSDRVPVGGLCNLN 310
+R LQF TGS R+P GGL LN
Sbjct: 1404 RRAFLQFITGSPRLPPGGLAALN 1426
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -1
Query: 250 NVLLLPEYDTRDKLQDRLLKAINYSKG 170
N L LP Y ++DK++++LL AI +G
Sbjct: 1453 NYLKLPPYSSKDKMREKLLYAITEGQG 1479
>03_05_0712 - 27057858-27057941,27058093-27058182,27058268-27058384,
27059759-27059866,27060314-27060406,27060499-27060669,
27061505-27061757,27061860-27062138,27062939-27063273,
27063364-27064332,27064711-27065182,27065243-27065291,
27066564-27066804,27067606-27067695,27068172-27068294,
27068365-27068418
Length = 1175
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 496 QVFDFHELEKSTEYDGAYASDSXMLQXFWGIV 401
Q FD +L +T+Y G Y S ++ FW ++
Sbjct: 1050 QDFDVDDLRNNTKYTGGYTESSRSVKLFWEVI 1081
>01_06_1729 +
39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 355 DRVGPGARGRAVQLELCDREXRPGLRPASHRAHFFNVLLLPEYDTR-DKLQDRLLKAINY 179
D P R Q+ LC R RPGL+P +H + LP+++++ + LL +N+
Sbjct: 83 DDRSPSFPTRHQQVGLCPRRTRPGLKPVWRSSHRYT---LPQFESKAGATRKSLLAGLNF 139
>09_04_0560 -
18519024-18519145,18519330-18519435,18519671-18519907,
18521371-18521810,18523215-18525012
Length = 900
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -2
Query: 396 SLPLEXKRKLLQFTTGSDRVP---VGGLCNLNFVIAXNGPDCDXLPTAHTSSMSYCYPS 229
SL +E +R+LL F T +P GGL + ++ + D LP++HT C P+
Sbjct: 750 SLSIEQQRQLLFFWTSVKYLPSDGFGGLASKLYIYKVS-ESADRLPSSHTCFYRLCLPA 807
>11_02_0149 - 8801675-8804332
Length = 885
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/93 (22%), Positives = 43/93 (46%)
Frame = -2
Query: 330 GGLCNLNFVIAXNGPDCDXLPTAHTSSMSYCYPSTTLETNYRTDS*KPSTTRRDSVCIEA 151
GGL NL+ + C L +A++SS SYC+P + + R + + T + +
Sbjct: 636 GGLHNLHSLQTLFIRGCPKLLSAYSSSSSYCFPFPSTLDSLRIEDVEDMHTFAPLSNLTS 695
Query: 150 MLYDDDDATQRGTNSTKLA*YYSRGVATMMFLY 52
+ Y + ++ L ++++G T + +Y
Sbjct: 696 LTYLFVENCRKDLRGEGLWTFFTQGCLTRLCVY 728
>08_02_0749 - 20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -2
Query: 309 FVIAXNGPDCDXLPTAHTSSMSYCYPSTTLETNYRTDS*KPSTTRRDSVC 160
FV+A +G + TA+ S M+ + TL ++YR S + S RD C
Sbjct: 1106 FVVAPDGTLVKAVDTANASKMARRVRNNTLSSSYRPLSGRGSPIDRDGGC 1155
>02_05_1331 + 35736543-35736638,35737407-35737525,35737670-35737715,
35738117-35738172,35738452-35738547,35738844-35738961,
35739406-35739672,35740023-35740124,35740302-35740659,
35740750-35740863,35741045-35741676,35741895-35742103,
35742597-35742819,35743419-35743538,35743888-35743914,
35744281-35745045,35745431-35748511
Length = 2142
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = -2
Query: 315 LNFVIAXNGPDCDXLPTAHTSSMSYCYPSTTLETNYRTDS*KPSTTRRDSVC--IEAMLY 142
LNF+I DCD P+A + Y S + P T VC + ML
Sbjct: 1307 LNFLITRGIEDCDANPSAEITGAFATYFSVAKRVSLYLARICPQQTIDHLVCELSQRMLE 1366
Query: 141 DDDDATQRG--TNSTKLA*YYSRGVAT 67
DD++ + G S + +S+G +T
Sbjct: 1367 DDEEPVRPGKVDTSANVVLEFSQGPST 1393
>01_01_0862 +
6714041-6714358,6714462-6714603,6715511-6715735,
6715769-6716763,6717327-6717381,6717469-6717621,
6718130-6718299,6718388-6718870
Length = 846
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = -2
Query: 483 STSWKSRQNTMARTRPTLKCYX-TFGASXHSLPLEXKR----KLLQFTTGSDRVPVGGLC 319
ST WK + + R R L+ Y +F HS E K+ ++ G D P
Sbjct: 107 STGWKGQSTLIGRKRIPLRPYAISFSEKSHSNE-EGKQVQAFAVVLLHDGIDSFPD---- 161
Query: 318 NLNFVIAXNGPDCDXLPTAHTSSMSYCYPSTTL 220
F++A + +C+ + +++ S M+Y Y T L
Sbjct: 162 RPQFLMAKSTEECEAVCSSYCSCMAYAYDVTCL 194
>12_01_0084 - 678324-679643
Length = 439
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -3
Query: 257 LLQCPTATRVRH*RQTTGQTLESHQLL-EGIRFALK 153
+ + T+ + +QT+G +LE QLL EGIR ALK
Sbjct: 394 IFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALK 429
>11_01_0083 - 629885-631189
Length = 434
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -3
Query: 257 LLQCPTATRVRH*RQTTGQTLESHQLL-EGIRFALK 153
+ + T+ + +QT+G +LE QLL EGIR ALK
Sbjct: 394 IFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALK 429
>02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 384 EXKRKLLQFTTGSDRVPVGGLCNLN 310
E + QF TG+ R+P GGL LN
Sbjct: 1688 EQQHAFCQFVTGAPRLPPGGLAALN 1712
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,286,034
Number of Sequences: 37544
Number of extensions: 222520
Number of successful extensions: 506
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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