Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0256.Seq
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12797| Best HMM Match : HECT (HMM E-Value=0) 82 4e-16
SB_44630| Best HMM Match : HECT (HMM E-Value=0) 55 5e-08
SB_47662| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_13743| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_5238| Best HMM Match : HECT (HMM E-Value=0) 37 0.011
SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_35794| Best HMM Match : DltD_M (HMM E-Value=0.17) 32 0.31
SB_20163| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_53819| Best HMM Match : HECT (HMM E-Value=4e-07) 32 0.40
SB_25423| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_51591| Best HMM Match : HECT (HMM E-Value=0) 31 0.93
SB_33703| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_54325| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_41925| Best HMM Match : MutS_I (HMM E-Value=1.6) 28 5.0
SB_6022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_59169| Best HMM Match : Sre (HMM E-Value=3.3) 28 6.6
>SB_12797| Best HMM Match : HECT (HMM E-Value=0)
Length = 749
Score = 81.8 bits (193), Expect = 4e-16
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Frame = -1
Query: 499 KQVFDFHELEKSTEYDGAYASDSXMLQXFWGIVXQLXXXXXXXXASV---HDRVGPGARG 329
+Q FDF LEK+TEYDG DS +++ FW IV DR+ G
Sbjct: 636 RQDFDFDALEKATEYDGGLTKDSALIRWFWEIVHSFDMEQKRQLLMFTTGSDRIPVGGLA 695
Query: 328 RAVQLELCDREXRPGLRPASHRAHFFNVLLLPEYDTRDKLQDRLLKAINYSKGFGL 161
+ + + P L P +H FNVLLLP+Y T++KL++RLLKAI ++KGFGL
Sbjct: 696 KLKLIIAKNGPDSPRL-PTAHTC--FNVLLLPDYATKEKLEERLLKAITHAKGFGL 748
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = -2
Query: 399 HSLPLEXKRKLLQFTTGSDRVPVGGLCNLNFVIAXNGPDCDXLPTAHT 256
HS +E KR+LL FTTGSDR+PVGGL L +IA NGPD LPTAHT
Sbjct: 669 HSFDMEQKRQLLMFTTGSDRIPVGGLAKLKLIIAKNGPDSPRLPTAHT 716
>SB_44630| Best HMM Match : HECT (HMM E-Value=0)
Length = 1003
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = -2
Query: 378 KRKLLQFTTGSDRVPVGGLCNLNFVIAXNGPDCDXLPTAHTSSMSYCYPSTT 223
K+ LL F TGSDRVP+ GL NL F+I +G D D LPTA T P T
Sbjct: 930 KKALLMFVTGSDRVPLKGLSNLTFIIQKHGQDSDRLPTAMTCFNRLLLPEYT 981
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Frame = -1
Query: 493 VFDFHELEKSTEYDGAYASDSXMLQXFWGIVXQL---XXXXXXXXASVHDRVGPGARGRA 323
V DF +L + YD Y++ ++ FW + ++ + DRV +G +
Sbjct: 892 VLDFSDLVLAASYDDGYSAQHSTIKMFWNVFNEMTNHQKKALLMFVTGSDRV--PLKGLS 949
Query: 322 VQLELCDREXRPGLRPASHRAHFFNVLLLPEYDTRDKLQDRLLKAINYSKGFGL 161
+ + + R + FN LLLPEY + +L++RL+ AI SKGFGL
Sbjct: 950 NLTFIIQKHGQDSDRLPTAMT-CFNRLLLPEYTSPKRLKERLIVAIENSKGFGL 1002
>SB_47662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = -2
Query: 384 EXKRKLLQFTTGSDRVPVGGLCNLNFVIAXNGPDCDXLPTAHTSSM 247
+ K+K+L F TGSDR+P+GG+ + F I + TAH++S+
Sbjct: 208 DLKKKMLLFATGSDRIPIGGMAEMEFKIV-------RMDTAHSTSI 246
>SB_13743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Frame = -2
Query: 549 PLGTFFSPERS*NA----VCGSRFSISTSWKSRQNTMARTRPTLKCYXTFGASXHSLPLE 382
P+ F ER + +CG + W+ N F + +S +E
Sbjct: 428 PISAFIGEERRASQCELLMCGLGEIDTVDWRKNSNYRGEYHDKHIVIQWFWKAVNSFDIE 487
Query: 381 XKRKLLQFTTGSDRVPVGGLCNLNFVIAXNGP 286
+ +LLQF TG+ RVP+ G L NGP
Sbjct: 488 TRARLLQFVTGTSRVPMNGFSEL---YGSNGP 516
>SB_5238| Best HMM Match : HECT (HMM E-Value=0)
Length = 212
Score = 37.1 bits (82), Expect = 0.011
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = -2
Query: 576 FLEGXRLRIPLG--TFFSPERS*NAVCGSRFSISTSWKSRQNTMAR--TRPTLKCYXTFG 409
FLEG +PL +F +CG + W+ QNT+ R TR + K F
Sbjct: 66 FLEGMHEVLPLYWIQYFDERELELMLCGMQEIDVEDWQ--QNTVYRHYTRNS-KQVMWFW 122
Query: 408 ASXHSLPLEXKRKLLQFTTGSDRVPVGGLCNLNFVIAXNGP 286
+ + E + +LLQF TG+ R+PVGG L + NGP
Sbjct: 123 QAVKAYDNEKRIRLLQFVTGTCRLPVGGFTEL---MGSNGP 160
>SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1320
Score = 36.3 bits (80), Expect = 0.019
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Frame = -2
Query: 576 FLEGXRLRIP---LGTFFSPERS*NAVCGSRFSISTSWKSRQNTMARTRPTL-KCYXTFG 409
F++G +P LG F E +CG+ K+ + +A K F
Sbjct: 776 FIQGLNELVPDNLLGMFDENELE-LLMCGTGHISVADMKAHHHVLAGGGQRFTKIMDWFW 834
Query: 408 ASXHSLPLEXKRKLLQFTTGSDRVPVGGLCNLNFVIAXNG-PDCDXLPTAHT 256
SL E +LLQF TGS ++P GG L+ + + LPTAHT
Sbjct: 835 TIVSSLTQEELARLLQFVTGSSQLPPGGFAELSPQLQISYIATSQALPTAHT 886
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 541 DILQPGKKLKCCLWKQVFDFHELEKSTEYDGAYASDSXMLQXFWGI 404
+ P + ++ + Q +DF LEK TEY G Y ++ FW +
Sbjct: 328 EFFHPQELMEMVVGCQEYDFEVLEKITEYKGEYYRKHPVIANFWTV 373
>SB_35794| Best HMM Match : DltD_M (HMM E-Value=0.17)
Length = 204
Score = 32.3 bits (70), Expect = 0.31
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -2
Query: 396 SLPLEXKRKLLQFTTGSDRVPVGGLCNLNFVIAXNGPDCDXLPTAHTSSMSYCYPSTTLE 217
S+ L +K LQFTTGSD + V + ++F + +G D P AHT C P L
Sbjct: 126 SMDLSTLKKFLQFTTGSDLITVQSIV-ISF-CSLDG--ADRRPIAHT-----CGPILELP 176
Query: 216 TNYRT 202
T Y++
Sbjct: 177 TTYQS 181
>SB_20163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -2
Query: 411 GASXHSLPLEXKRKLLQFTTGSDRVPVGGLCNLNFVIAXNGP 286
G + + E + +LLQF TG+ R+PVGG L + NGP
Sbjct: 57 GGAVKAYDNEKRIRLLQFVTGTCRLPVGGFTEL---MGSNGP 95
>SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = -2
Query: 414 FGASXHSLPLEXKRKLLQFTTGSDRVPVGGLCNL-------NFVIAXNGPDCDXLPTAHT 256
F + S + K LQF TG+ +VP+ G L F I + + D LP+AHT
Sbjct: 2408 FWRALRSFDQAARAKFLQFVTGTSKVPLQGFAALEGMNGFQKFQIHRDDRNTDRLPSAHT 2467
>SB_53819| Best HMM Match : HECT (HMM E-Value=4e-07)
Length = 279
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = -2
Query: 414 FGASXHSLPLEXKRKLLQFTTGSDRVPVGGLCNL-------NFVIAXNGPDCDXLPTAHT 256
F + S + K LQF TG+ +VP+ G L F I + + D LP+AHT
Sbjct: 166 FWRALRSFDQAARAKFLQFVTGTSKVPLQGFAALEGMNGFQKFQIHRDDRNTDRLPSAHT 225
>SB_25423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1
Query: 250 NVLLLPEYDTRDKLQDRLLKAINYSKGFGL 161
N+L LPEY T + +++RLL A+ GF L
Sbjct: 498 NMLKLPEYPTDEMMRERLLYAVESGAGFEL 527
>SB_51591| Best HMM Match : HECT (HMM E-Value=0)
Length = 694
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 396 SLPLEXKRKLLQFTTGSDRVPVGGLCNLNFVIAXN 292
SL E K LL+F+TGS VP+GG L + N
Sbjct: 608 SLKEEEKALLLKFSTGSPCVPIGGFAALQGLSGAN 642
>SB_33703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 408 ASXHSLPLEXKRKLLQFTTGSDRVPVGGLCNLNFVI 301
AS LPL+ K +L++ GS VP N FV+
Sbjct: 542 ASSRPLPLDLKNRLIEPLVGSCIVPFSSTSNKGFVV 577
>SB_54325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 269 GSXSQSGPXLAITKFKLHSPPTGTRSDPVVN*SSFRLXSSGKLXHDAPKV 418
G+ S S F LH PP G + P V + SSG +++P V
Sbjct: 152 GTVSPSESPNKKESFPLHEPPEGEAAPPCVPSNKREASSSGTAMNESPAV 201
>SB_41925| Best HMM Match : MutS_I (HMM E-Value=1.6)
Length = 261
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 472 PARGNRKPASTNSISTSFRAEECPEXDSQXXTLQK 576
P+R RKP +SIS+ F A+ C + T K
Sbjct: 71 PSRDRRKPTGQSSISSFFGAKSCKSSQAFADTSSK 105
>SB_6022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 472 PARGNRKPASTNSISTSFRAEECPEXDSQXXTLQK 576
P+R RKP +SIS+ F A+ C + T K
Sbjct: 71 PSRDRRKPTGQSSISSFFGAKSCKSSQAFADTSSK 105
>SB_59169| Best HMM Match : Sre (HMM E-Value=3.3)
Length = 447
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 152 LCYTTTTTQRNAELTQQN*HNIIVEESPR*CFCII 48
+C TTT +RN QN +N E S CF I+
Sbjct: 300 ICITTTANERNNNNYNQNNNNNNNERSSLICFTIV 334
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,332,989
Number of Sequences: 59808
Number of extensions: 252478
Number of successful extensions: 543
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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