Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0254.Seq
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025722-2|AAK68508.1|  605|Caenorhabditis elegans Hypothetical ...    32   0.34 
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    31   0.79 
U53153-6|AAT81184.1|  638|Caenorhabditis elegans Germinal center...    31   1.0  
U53153-5|AAK77641.1|  651|Caenorhabditis elegans Germinal center...    31   1.0  
U53153-4|AAK77642.2|  650|Caenorhabditis elegans Germinal center...    31   1.0  
U53153-3|AAC69038.1|  653|Caenorhabditis elegans Germinal center...    31   1.0  
AF068708-11|AAC17757.1|  136|Caenorhabditis elegans Hypothetical...    31   1.0  
U80445-7|AAB37798.1|  368|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U80437-6|AAB37621.1|  368|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z81543-3|CAB04425.1|  322|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AL021469-1|CAA16287.1|  207|Caenorhabditis elegans Hypothetical ...    28   7.4  
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    28   7.4  

>AC025722-2|AAK68508.1|  605|Caenorhabditis elegans Hypothetical
           protein Y50D4C.3 protein.
          Length = 605

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -3

Query: 330 GPR-TALHTAAAAPPRGPSLGPAHPGPHIRCADFFDAPQSRWNER*TGAVGFYP 172
           GP+ +A      A  R  + GP +PGP  R AD+F   + R     TG+VG  P
Sbjct: 362 GPKNSAPQNQRPAAARDGNRGPKNPGPQNRAADYF-RDRDRQQRPSTGSVGQQP 414


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +3

Query: 297 PPPLCAGRCVAPPAGPVCAFDAAGTX-RTFATLCELEXVSCRESTYYAVTSLGVC 458
           P  +C   C     G V      G+   T++ LCEL+  +C+        S+G+C
Sbjct: 798 PDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFACKHQIDVVPVSMGIC 852


>U53153-6|AAT81184.1|  638|Caenorhabditis elegans Germinal center
           kinase family protein1, isoform d protein.
          Length = 638

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 355 KAHTGPAGGATHRPAHSGGGTPSRTLARTSS 263
           ++HT  +GGAT     S  G+P+ +LART S
Sbjct: 398 QSHTASSGGATTITLGSPNGSPTSSLARTQS 428


>U53153-5|AAK77641.1|  651|Caenorhabditis elegans Germinal center
           kinase family protein1, isoform b protein.
          Length = 651

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 355 KAHTGPAGGATHRPAHSGGGTPSRTLARTSS 263
           ++HT  +GGAT     S  G+P+ +LART S
Sbjct: 411 QSHTASSGGATTITLGSPNGSPTSSLARTQS 441


>U53153-4|AAK77642.2|  650|Caenorhabditis elegans Germinal center
           kinase family protein1, isoform c protein.
          Length = 650

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 355 KAHTGPAGGATHRPAHSGGGTPSRTLARTSS 263
           ++HT  +GGAT     S  G+P+ +LART S
Sbjct: 410 QSHTASSGGATTITLGSPNGSPTSSLARTQS 440


>U53153-3|AAC69038.1|  653|Caenorhabditis elegans Germinal center
           kinase family protein1, isoform a protein.
          Length = 653

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 355 KAHTGPAGGATHRPAHSGGGTPSRTLARTSS 263
           ++HT  +GGAT     S  G+P+ +LART S
Sbjct: 413 QSHTASSGGATTITLGSPNGSPTSSLARTQS 443


>AF068708-11|AAC17757.1|  136|Caenorhabditis elegans Hypothetical
           protein C18G1.1 protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -2

Query: 178 LSIQSLKLYKQKPFRLTFPTESKYRHHRTAYEIVL 74
           +S+  LK Y +KP R    TE++ +H+RT + I+L
Sbjct: 45  ISLFPLKDYSRKPGRGPQRTEAEMKHYRTVFYIIL 79


>U80445-7|AAB37798.1|  368|Caenorhabditis elegans Hypothetical
           protein C50F2.5 protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -2

Query: 115 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 14
           +KY    T  E+V+ +N++    SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222


>U80437-6|AAB37621.1|  368|Caenorhabditis elegans Hypothetical
           protein C43E11.5 protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -2

Query: 115 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 14
           +KY    T  E+V+ +N++    SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222


>Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical
           protein R107.6 protein.
          Length = 1020

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 147 CLYSFSDCMDKSRLRQSTVHSNEIGER--QRSQRTGYEAPGELVRARVREGVPPPLCAGR 320
           C+ S+S   DK++ RQ       + E   ++ +RT     GEL++A + +  P    AGR
Sbjct: 169 CIASYSTSKDKNQRRQLCALLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGR 228


>Z81543-3|CAB04425.1|  322|Caenorhabditis elegans Hypothetical
           protein F49B2.3 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = -2

Query: 343 GPAGGATHRPAHSGGGTPSRTLARTSSPGASYP 245
           GP G   HRP HS G T   TL     P A  P
Sbjct: 72  GPRGARDHRPRHSAGNT---TLLPRRRPHACTP 101


>AL021469-1|CAA16287.1|  207|Caenorhabditis elegans Hypothetical
           protein Y116A8B.1 protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = -2

Query: 343 GPAGGATHRPAHSGGGTPSRTLARTSSPGASYP 245
           GP G   HRP HS G T   TL     P A  P
Sbjct: 70  GPRGARDHRPRHSAGNT---TLLPRRRPHACAP 99


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
            assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -2

Query: 430  YVLSRHETXSSSHRVANVLXVPAASKAHTGPAGGATHRPAHSGGGTPSRT-LARTSSPGA 254
            Y +    T +SS   ANV  + A + A    +   T + A +   TPS + +A   +P  
Sbjct: 2826 YGMPTTSTAASSSSTANVASMAAMAAAAQAASTPTTSKQASASTSTPSTSAVASAQTPST 2885

Query: 253  SYP 245
            S P
Sbjct: 2886 SVP 2888


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,743,024
Number of Sequences: 27780
Number of extensions: 309503
Number of successful extensions: 1150
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)