Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0253.Seq
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0133 + 8661030-8661141,8661727-8662031,8662158-8662331,866...    32   0.50 
01_05_0369 - 21468204-21468595,21471417-21471606,21471680-214718...    30   1.5  
09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040           29   2.7  
11_01_0410 - 3111899-3112513,3112907-3112962,3113884-3114355           29   4.7  
02_03_0202 + 16359539-16359763,16360113-16360193,16361362-163616...    28   8.2  

>11_02_0133 +
           8661030-8661141,8661727-8662031,8662158-8662331,
           8662469-8662783,8662886-8663456,8663474-8663786,
           8663870-8663968,8664202-8664315,8664403-8664463,
           8664565-8664657,8664742-8664927
          Length = 780

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3

Query: 162 PRRLCDRQNKVPSTLPTSLAWGKHWIARAENPLVGTMMIFDPID 31
           P R+C  Q+ V      +LA G H+I    +P  GT+++ DP+D
Sbjct: 615 PTRICQTQHTV------TLALGDHYICLLIHPKDGTVVVLDPLD 652


>01_05_0369 -
           21468204-21468595,21471417-21471606,21471680-21471867,
           21484028-21484580
          Length = 440

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 1   ARRTRPRRPAVDWIENHHCAHKRIFSPSYPVLTPRERSGKC 123
           AR TR RRP  +     HC  +   S  +P    R R   C
Sbjct: 106 ARETRQRRPEAEQWRQRHCCQRGRVSGDFPTNRRRRRGRGC 146


>09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040
          Length = 339

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 205 GLPRMEHRSGPPSAASTAMRPP 140
           GL R  HR+G P AA+ A +PP
Sbjct: 261 GLRRRAHRTGEPRAAAAACQPP 282


>11_01_0410 - 3111899-3112513,3112907-3112962,3113884-3114355
          Length = 380

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 38  GSKIIIVPTRGFSARAIQCLP-HASEVGSVDGTLFW 142
           G+ ++  P R  SA     +  H +  G VDGTLFW
Sbjct: 177 GNLMLTGPYRAISADGSFLIEVHTNNAGDVDGTLFW 212


>02_03_0202 +
           16359539-16359763,16360113-16360193,16361362-16361600,
           16361828-16362029,16362108-16362188,16362272-16362455,
           16362625-16362791,16363020-16363802
          Length = 653

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = +3

Query: 81  ELSSAYPTRAKWEVSTGPYF----GGRIAVEAADGGPERCSIRGNPNSAQDAYILRIHHD 248
           E+ SA P   KW+ +    F    G  I VE A GG +   ++ +P+S   +  L++H +
Sbjct: 166 EVRSAVPP--KWDPAALSRFIKTYGTHIIVEMAVGGQDVICVKQSPSSTISSADLKLHLE 223

Query: 249 EXG 257
           + G
Sbjct: 224 DLG 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,449,189
Number of Sequences: 37544
Number of extensions: 369885
Number of successful extensions: 1005
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)