BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0251.Seq
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110911-1|AAI10912.1| 314|Homo sapiens fumarylacetoacetate hyd... 74 5e-13
BC064511-1|AAH64511.1| 314|Homo sapiens fumarylacetoacetate hyd... 74 5e-13
BC009403-1|AAH09403.1| 314|Homo sapiens fumarylacetoacetate hyd... 74 5e-13
AF151863-1|AAD34100.1| 314|Homo sapiens CGI-105 protein protein. 74 5e-13
AC018892-1|AAY14641.1| 314|Homo sapiens unknown protein. 74 5e-13
AC009238-1|AAY14753.1| 314|Homo sapiens unknown protein. 74 5e-13
CR533499-1|CAG38530.1| 224|Homo sapiens DKFZP566J2046 protein. 30 8.4
BC063017-1|AAH63017.1| 226|Homo sapiens FAHD1 protein protein. 30 8.4
AL031722-3|CAM26476.1| 226|Homo sapiens fumarylacetoacetate hyd... 30 8.4
AL031722-2|CAM26475.1| 248|Homo sapiens fumarylacetoacetate hyd... 30 8.4
AK094199-1|BAC04308.1| 224|Homo sapiens protein ( Homo sapiens ... 30 8.4
AE006639-9|AAK61295.1| 221|Homo sapiens similar to homoprotocat... 30 8.4
>BC110911-1|AAI10912.1| 314|Homo sapiens fumarylacetoacetate
hydrolase domain containing 2A protein.
Length = 314
Score = 74.1 bits (174), Expect = 5e-13
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +3
Query: 264 LEKVKKLKSTKPATIPLSSVTLTAPIHGVDKILCIGLNYKDHCQEQNLTPPPVPMVFSKF 443
L ++ + + +P S VT AP+ DK++C+G+NY DHC+EQN+ P P++FSKF
Sbjct: 77 LSVARRALAAQLPVLPRSEVTFLAPVTRPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKF 136
Query: 444 SSTIIGP 464
+S+I+GP
Sbjct: 137 ASSIVGP 143
>BC064511-1|AAH64511.1| 314|Homo sapiens fumarylacetoacetate
hydrolase domain containing 2B protein.
Length = 314
Score = 74.1 bits (174), Expect = 5e-13
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +3
Query: 264 LEKVKKLKSTKPATIPLSSVTLTAPIHGVDKILCIGLNYKDHCQEQNLTPPPVPMVFSKF 443
L ++ + + +P S VT AP+ DK++C+G+NY DHC+EQN+ P P++FSKF
Sbjct: 77 LSVARRALAAQLPVLPWSEVTFLAPVTWPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKF 136
Query: 444 SSTIIGP 464
+S+I+GP
Sbjct: 137 ASSIVGP 143
>BC009403-1|AAH09403.1| 314|Homo sapiens fumarylacetoacetate
hydrolase domain containing 2A protein.
Length = 314
Score = 74.1 bits (174), Expect = 5e-13
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +3
Query: 264 LEKVKKLKSTKPATIPLSSVTLTAPIHGVDKILCIGLNYKDHCQEQNLTPPPVPMVFSKF 443
L ++ + + +P S VT AP+ DK++C+G+NY DHC+EQN+ P P++FSKF
Sbjct: 77 LSVARRALAAQLPVLPRSEVTFLAPVTRPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKF 136
Query: 444 SSTIIGP 464
+S+I+GP
Sbjct: 137 ASSIVGP 143
>AF151863-1|AAD34100.1| 314|Homo sapiens CGI-105 protein protein.
Length = 314
Score = 74.1 bits (174), Expect = 5e-13
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +3
Query: 264 LEKVKKLKSTKPATIPLSSVTLTAPIHGVDKILCIGLNYKDHCQEQNLTPPPVPMVFSKF 443
L ++ + + +P S VT AP+ DK++C+G+NY DHC+EQN+ P P++FSKF
Sbjct: 77 LSVARRALAAQLPVLPRSEVTFLAPVTRPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKF 136
Query: 444 SSTIIGP 464
+S+I+GP
Sbjct: 137 ASSIVGP 143
>AC018892-1|AAY14641.1| 314|Homo sapiens unknown protein.
Length = 314
Score = 74.1 bits (174), Expect = 5e-13
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +3
Query: 264 LEKVKKLKSTKPATIPLSSVTLTAPIHGVDKILCIGLNYKDHCQEQNLTPPPVPMVFSKF 443
L ++ + + +P S VT AP+ DK++C+G+NY DHC+EQN+ P P++FSKF
Sbjct: 77 LSVARRALAAQLPVLPWSEVTFLAPVTWPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKF 136
Query: 444 SSTIIGP 464
+S+I+GP
Sbjct: 137 ASSIVGP 143
>AC009238-1|AAY14753.1| 314|Homo sapiens unknown protein.
Length = 314
Score = 74.1 bits (174), Expect = 5e-13
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +3
Query: 264 LEKVKKLKSTKPATIPLSSVTLTAPIHGVDKILCIGLNYKDHCQEQNLTPPPVPMVFSKF 443
L ++ + + +P S VT AP+ DK++C+G+NY DHC+EQN+ P P++FSKF
Sbjct: 77 LSVARRALAAQLPVLPRSEVTFLAPVTRPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKF 136
Query: 444 SSTIIGP 464
+S+I+GP
Sbjct: 137 ASSIVGP 143
>CR533499-1|CAG38530.1| 224|Homo sapiens DKFZP566J2046 protein.
Length = 224
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 357 ILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTIIGPDQPV 476
I+C+G NY DH +E P++F K S+ P+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPI 59
>BC063017-1|AAH63017.1| 226|Homo sapiens FAHD1 protein protein.
Length = 226
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 357 ILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTIIGPDQPV 476
I+C+G NY DH +E P++F K S+ P+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPI 59
>AL031722-3|CAM26476.1| 226|Homo sapiens fumarylacetoacetate
hydrolase domain containing 1 protein.
Length = 226
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 357 ILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTIIGPDQPV 476
I+C+G NY DH +E P++F K S+ P+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPI 59
>AL031722-2|CAM26475.1| 248|Homo sapiens fumarylacetoacetate
hydrolase domain containing 1 protein.
Length = 248
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 357 ILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTIIGPDQPV 476
I+C+G NY DH +E P++F K S+ P+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPI 59
>AK094199-1|BAC04308.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ36880 fis, clone BGGI12000616, weakly similar to
Isomerase-like protein. ).
Length = 224
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 357 ILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTIIGPDQPV 476
I+C+G NY DH +E P++F K S+ P+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPI 59
>AE006639-9|AAK61295.1| 221|Homo sapiens similar to
homoprotocatechuate catabolism bifunctional
isomerase/decarboxylase protein.
Length = 221
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 357 ILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTIIGPDQPV 476
I+C+G NY DH +E P++F K S+ P+
Sbjct: 17 IVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPI 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,682,344
Number of Sequences: 237096
Number of extensions: 2121271
Number of successful extensions: 8921
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8921
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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